Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 118 1e-21
>seq2
Length=1089760
Score = 118 bits (130), Expect = 1e-21
Identities = 210/301 (70%), Gaps = 4/301 (1%)
Strand=Plus/Plus
Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044
|||||||| | ||| || ||||| || || || | ||||||||| |||| ||
Sbjct 279868 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTC 279927
Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104
|| | ||| || || | || || || ||||| ||||| || || ||||||| ||| ||
Sbjct 279928 TTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCGAAA 279987
Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164
|| | || ||||| ||| | ||| ||||||| |||||| | | |||| ||
Sbjct 279988 GCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCTGATATCCATCGCAGAGCCCAGTCT 280047
Query 17165 GCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA-ATTTCTCTTTTTCCT 17222
||||| |||| |||||| || || || ||||| | || | || | |||| | |
Sbjct 280048 GCTTTCTTGCGA-ATGCAAGGGATTGTGTCGATGGCGTCGAACAGATATGTCTTCTCTTT 280106
Query 17223 GTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCA 17282
| |||| ||| ||| || || ||||| |||||||||||||| ||||| || |||||||
Sbjct 280107 GG-GGTCCTTTACATAGGTGTCAATGAGAAGGCTGTACATTTCCGAGTGGATATTCTCCA 280165
Query 17283 T 17283
|
Sbjct 280166 T 280166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517542598235520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |