Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 8e-23
seq91 82.4 7e-11
>seq1
Length=1383374
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || || | ||||| ||||||||| | || ||| || || |||||||| |||||
Sbjct 702042 CCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 701983
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| ||| ||||| | ||| || || ||| | || || |||||||| || |||||
Sbjct 701982 AGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGA 701923
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|||||||||||||| || || || || | |||| ||||| | |||||| |||
Sbjct 701922 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACC 701863
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | ||| ||||| || || || ||||| || || |||||
Sbjct 701862 TCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || |||||||| ||| || ||||| || |||
Sbjct 701568 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCG 701509
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || || || ||| |||| || |||||||| || || || ||||||||||||||
Sbjct 701508 AGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 701449
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||| || | |||| ||||| || ||||||||| | || | || |||
Sbjct 701448 ATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTG 701389
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741
|| || || || || || || || ||||||||
Sbjct 701388 CCAGTAAGTGTCTTCACGAAGATTTGCATGGC 701357
>seq91
Length=177601
Score = 82.4 bits (90), Expect = 7e-11
Identities = 87/112 (78%), Gaps = 2/112 (2%)
Strand=Plus/Plus
Query 133224 TTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGA-TATACATTCGACGTGAACGG 133282
||||| || || ||||| ||||| || || || | |||| || | ||| || ||| ||||
Sbjct 134328 TTGACAACCTGGAACTCACCGGCAAGGACACGGC-GAGAGTAGATATTAGATGTGTACGG 134386
Query 133283 TTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATG 133334
|||||| |||||||||||||||| || || | |||| || |||||||||
Sbjct 134387 TTCGAAGCATTCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATG 134438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433827946689088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |