Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 7e-28
seq112 105 4e-18
seq17 91.5 1e-13
>seq1
Length=1383374
Score = 138 bits (152), Expect = 7e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| |||| ||||| || || | || ||| ||||| ||||||||||| ||
Sbjct 701814 CCGCCGCGGAGCCGGAGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAG 701755
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281
||| ||| |||| |||| |||||||||||| || || || ||||||||||| | ||||
Sbjct 701754 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 701695
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||||| ||||| ||| | | | | |||| ||| ||||||| ||
Sbjct 701694 ATCCCT-TCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGCTCGATTCAAC 701636
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||| || ||||| || || || || || ||||| |||||
Sbjct 701635 CTCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701588
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | || |||||||| | || || ||||| |||||||||||||||
Sbjct 701586 CCGCCACGGAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 701527
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||||| ||||| || || ||||||||||| |||
Sbjct 701526 AGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 701467
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| || | || | | |||| ||| | || |||||
Sbjct 701466 ATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCGACC 701407
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGC 34392
|| | ||||||||| ||||| || || || ||||| ||||| ||||| ||
Sbjct 701406 TCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTCACGAAGATTTGCATGGC 701357
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| ||||| |||||||||| ||| || || || || ||||| ||||||||||||
Sbjct 702042 CCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 701983
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct 701982 AGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGA 701923
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | |||| || | || ||
Sbjct 701922 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACC 701863
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||| || || ||||| || || || || || ||||| |||||
Sbjct 701862 TCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816
>seq112
Length=144762
Score = 105 bits (116), Expect = 4e-18
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | |||| || || | || ||| ||||| ||||||||||| ||
Sbjct 45873 CCGCCGCGGAGGCGGGGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAG 45932
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281
||| ||| |||| |||| ||||||||| || || || || ||||||||||| || | |
Sbjct 45933 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGATGTG 45992
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA--TCGGCTATCGAATCGGTCGATTCG 34339
| || |||||||| ||| | ||||| | || | | || | ||| |||| ||
Sbjct 45993 ATCCCT-TCCTTGTC--CTAAATCTTGCTCTTGATGTTGTTGATTGTGTCGCTCGACTCA 46049
Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| |||| |||||| || ||| | || || || |||| || ||||||||
Sbjct 46050 ACCTCCAGCGTGATCGTCTTGACAGTAAGTGTCTTCATGAAAATCTGCAT 46099
>seq17
Length=408214
Score = 91.5 bits (100), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
||||| |||||||||||| ||| ||| | || || | |||||||| ||||| ||
Sbjct 190084 TTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATC 190025
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
| |||||||||||| || | || |||||||| ||||| ||| | | | |
Sbjct 190024 AATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 189965
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|||| |||| ||| ||||| || | |||||||| ||||| ||||| || || || |||
Sbjct 189964 ATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 189905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323070173027840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |