Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1 145 6e-30 >seq1 Length=1383374 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||| || | || ||| | |||||||||| ||||||||||||||| |||||||||||| | Sbjct 702043 GCCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCT 701984 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || || |||| |||| || || || ||||| |||| |||||| ||||| ||||| Sbjct 701983 GAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGG 701924 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||||||| || || ||| || | | |||| | |||||| Sbjct 701923 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCAC 701864 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| |||||||||||||| || || ||||| || ||||||||||| Sbjct 701863 CTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| || ||||||||| |||||||||||| ||| ||| |||| || Sbjct 701568 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCG 701509 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || |||||||| |||| ||||| ||||| || || | |||||||||||| Sbjct 701508 AGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 701449 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || || || | | |||| | ||| ||||| | || || |||||| Sbjct 701448 ATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTG 701389 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || |||||||| |||||||||||| Sbjct 701388 CCAGTAAGTGTCTTCACGAAGATTTGCATG 701359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395072965849744