Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq91 232 8e-56
seq2 100 4e-16
>seq91
Length=177601
Score = 232 bits (256), Expect = 8e-56
Identities = 749/1148 (65%), Gaps = 30/1148 (3%)
Strand=Plus/Plus
Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008
|| |||||||| ||||| || ||||||| | | ||| |||| | ||||||||||||
Sbjct 134901 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 134960
Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068
||||| | ||| || || || || | || || |||||| | || || || |||
Sbjct 134961 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 135020
Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63128
|| || || || | || || |||||||| |||| | || | || || | ||| | |
Sbjct 135021 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATA-G 135079
Query 63129 ACTC-GAGCCTTTATTATA----GATTT-GTATCTCCTT----TCTCTTTCGTATAGAGT 63178
|| ||||||||| | || | |||||| | ||| ||||||||||
Sbjct 135080 TTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAGAG- 135138
Query 63179 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACA 63238
|||| ||||||||| || | || | | | | | ||| |||| |||||
Sbjct 135139 -------CGTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACA 135190
Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298
| | | ||| ||| || | || || |||| ||| || | |||||| |||| |
Sbjct 135191 GAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAT 135250
Query 63299 AGC-TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63357
|| || || || || | || |||| || || || || |||||| | || | |
Sbjct 135251 GGCGTAGAACAAG-TCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCA 135309
Query 63358 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63417
|| | | | || | ||||| || || | ||| ||||| | | | || || || |
Sbjct 135310 AAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCT 135369
Query 63418 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63477
| || || |||||||| | ||| | ||| || ||||| | || | | ||| || ||||
Sbjct 135370 TATTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAA 135429
Query 63478 TACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACT 63535
||||| || | || ||||| || | || ||| ||| |||||||||| | |
Sbjct 135430 GCCCGTTGGAGGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGG 135489
Query 63536 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63595
||||| |||| || || || || | || ||||| | || || || | |||||
Sbjct 135490 CATTGA--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTC 135547
Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655
||| || || || ||||| || || |||||| || | |||||| |||| ||| |
Sbjct 135548 ATATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGG 135607
Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715
||| ||||| || || || | ||| || |||||||| ||||| || || | || |
Sbjct 135608 TTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACAT 135667
Query 63716 TAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACAC 63774
|||||||||||||| || || || ||||| | || ||||| || ||||| ||||
Sbjct 135668 GAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACAC 135726
Query 63775 GCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATT 63834
|||| | |||||| || || | |||| ||| || ||| || || | || ||| |||
Sbjct 135727 GCATAAGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATC 135786
Query 63835 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63894
| |||| || || ||||||||||| | ||| |||||||| ||||| | ||| | |
Sbjct 135787 TCTCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCAG 135846
Query 63895 AATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT-GAAATAATCGGA 63953
| |||| || ||| | | | | || | || | | | | ||| || || |||||
Sbjct 135847 AGTTGAACTCATCAGCGTGTCTCATGAC-ACATTCGTAGGTCTCCTTGGAGATCATCGGG 135905
Query 63954 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 64013
|| ||||| |||||| ||||| ||||||| | | | ||| | ||| ||||
Sbjct 135906 GAGGGTTTCTGATTTTTCGGATTGACATAGTGGTAGAGGTCCGAGACCACGGAGGAAAAT 135965
Query 64014 AGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAA 64073
| || || || | ||||| || ||||| | || || | || || || | |||||
Sbjct 135966 TGCTTCTTGGTCTGTTTGTGGAGGTTTGAAACAGCGATACGTGCTGCGAGGACTGCATAG 136025
Query 64074 TCCGGATG 64081
|| |||||
Sbjct 136026 TCGGGATG 136033
>seq2
Length=1089760
Score = 100 bits (110), Expect = 4e-16
Identities = 222/330 (67%), Gaps = 6/330 (2%)
Strand=Plus/Plus
Query 33575 CATCAAA---CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631
||||||| || || || || ||||| |||||||| | | || | ||||| ||
Sbjct 279837 CATCAAAAGGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGA 279896
Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691
|| ||||| |||||||| || || | || ||||| || ||||| || || |||||
Sbjct 279897 GAAGGTGAGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCC 279956
Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC 33750
|| |||||||| ||||| || || || || || | |||| | || | | || | |
Sbjct 279957 AGAGAAGAAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTC 280016
Query 33751 T--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33808
| ||| |||||| ||||||| || || ||||| | ||||| || || ||
Sbjct 280017 TTTGTCTGATATCCATCGCAGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTC 280076
Query 33809 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33868
||||| | || ||||| | || || || || || ||||| || || || | |||
Sbjct 280077 GATGGCGTCGAACAGATATGTCTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAG 280136
Query 33869 ACTATACATTTCCGAATGAATGTTTTCAAT 33898
|| ||||||||||| || || || || ||
Sbjct 280137 GCTGTACATTTCCGAGTGGATATTCTCCAT 280166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629813947057920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |