Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq91 221 2e-52 seq2 109 7e-19 >seq91 Length=177601 Score = 221 bits (244), Expect = 2e-52 Identities = 746/1144 (65%), Gaps = 22/1144 (2%) Strand=Plus/Plus Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 65801 || |||||||| || || || ||||||| | | ||| |||| | |||||||||||| Sbjct 134901 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 134960 Query 65802 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 65861 ||||| | |||||| || || || | || || |||||| | || || || ||| Sbjct 134961 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 135020 Query 65862 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 65921 || || || || | || || |||||||| |||| | || | || || | ||| | | Sbjct 135021 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATA-G 135079 Query 65922 ACTC-GAGCCTTTATTATAGATTTGT-ATCTCTTTTCTCTTTCGTATAGT----GTATAC 65975 || ||||||||| || | | | | | ||| ||| ||| ||||| Sbjct 135080 TTTCTGAGCCTTTAC---AGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAG 135136 Query 65976 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 66035 | |||| ||||||||| || | || | | | | ||||| |||| ||||| | Sbjct 135137 AG-CGTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAG 135194 Query 66036 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 66095 | | ||| ||| || | || || |||| ||| || | |||||| |||| | || Sbjct 135195 AGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCG 135254 Query 66096 ATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 66155 || || || | | |||| || || || || |||||| | || | | || Sbjct 135255 TAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAG 135314 Query 66156 GCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 66215 | | | || ||||| || || | ||| ||||| | | | || || || || || Sbjct 135315 TCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTG 135374 Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275 || |||||||| | ||| | ||| || ||||| | || | | ||| || |||| || Sbjct 135375 CCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCG 135434 Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTG 66333 ||||| || || ||||| || | || ||| ||| | |||||||| | | |||| Sbjct 135435 TTGGAGGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTG 135494 Query 66334 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 66393 | |||| || || || || | || ||||| | || || || | || ||||| | Sbjct 135495 A--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATA 135552 Query 66394 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 66453 | ||||| || || || || |||||| || | |||||| |||| ||| | || Sbjct 135553 TTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAG 135612 Query 66454 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 66513 ||||| || || || | ||| || |||||||| ||||| || || | || | |||| Sbjct 135613 GGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGAT 135672 Query 66514 TGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATT 66572 |||||||||| || || || ||||| | || ||||| || ||||| |||||||| Sbjct 135673 TGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGCATA 135731 Query 66573 AACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTC 66631 | |||||| || || | |||| | | |||| ||| || || | || ||| ||| | || Sbjct 135732 AGCATGTGTTGGGGCCGTTCAGC-AACTTGATTGCCAATCTTGAGCAGGTATGATCTCTC 135790 Query 66632 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691 || || || ||||||||||| | ||| |||||||| ||||| | ||| | ||||| Sbjct 135791 CAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCAGAGTT 135850 Query 66692 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATCGGAGAAT 66750 || | ||| | | | | || |||| | | | | ||| || || ||||| || Sbjct 135851 GAACTCATCAGCGTGTCTCATGAC-ACATTCGTAGGTCTCCTTGGAGATCATCGGGGAGG 135909 Query 66751 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 66810 ||||| |||||| ||||||||||||| | | | ||| | ||| |||| | | Sbjct 135910 GTTTCTGATTTTTCGGATTGACATAGTGGTAGAGGTCCGAGACCACGGAGGAAAATTGCT 135969 Query 66811 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCG 66870 | || || | |||||| || ||||| || || || | || || | | ||||| || | Sbjct 135970 TCTTGGTCTGTTTGTGGAGGTTTGAAACAGCGATACGTGCTGCGAGGACTGCATAGTCGG 136029 Query 66871 GATG 66874 |||| Sbjct 136030 GATG 136033 >seq2 Length=1089760 Score = 109 bits (120), Expect = 7e-19 Identities = 205/299 (69%), Gaps = 3/299 (1%) Strand=Plus/Plus Query 36179 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 36238 |||||||| | | || | |||||||| || ||||| |||||||| || || | Sbjct 279868 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTC 279927 Query 36239 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 36298 || ||||| || ||||| ||||| |||||||| ||||| || ||||| || || || || Sbjct 279928 TTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCGAAA 279987 Query 36299 GCAATAAGTCTCTCTCCATAAC-CGGCACT--GTCATGTATCCACTTTTGAGCCCAATCG 36355 || | |||| | || | | || | || ||| |||||| ||||||| || Sbjct 279988 GCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCTGATATCCATCGCAGAGCCCAGTCT 280047 Query 36356 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 36415 || ||||| | ||||| ||||| || || || | || ||||| | || || || Sbjct 280048 GCTTTCTTGCGAATGCAAGGGATTGTGTCGATGGCGTCGAACAGATATGTCTTCTCTTTG 280107 Query 36416 CTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 36474 || || ||||| || ||||| | ||| || ||||||||||| || || || || || Sbjct 280108 GGGTCCTTTACATAGGTGTCAATGAGAAGGCTGTACATTTCCGAGTGGATATTCTCCAT 280166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168982597760