Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq91 217 2e-51 seq2 118 2e-21 >seq91 Length=177601 Score = 217 bits (240), Expect = 2e-51 Identities = 748/1144 (65%), Gaps = 22/1144 (2%) Strand=Plus/Plus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 || |||||||| || || || ||||||| | | ||| |||| | || |||||||| Sbjct 134901 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 134960 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 || || | ||||| || || || | || || |||||| | || || || ||| Sbjct 134961 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 135020 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 || || || || | || || |||||||| |||| | || | || || | ||| | | Sbjct 135021 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATA-G 135079 Query 79801 ACTC-GAGCCTTTATTATAGACTTGT-ATCTCTTTTCTCTTTCGTAT-TGTGTA-TATA- 79855 || ||||||||| || || | | | | ||| ||| || | | | |||| Sbjct 135080 TTTCTGAGCCTTTAC---AGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAG 135136 Query 79856 ATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCA 79915 | |||| ||||||||| || | || ||| | | ||||| || | |||||| | | Sbjct 135137 AGCGTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGA 135195 Query 79916 ACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-T 79974 | ||| ||| | | || || |||| ||| || | |||||| |||| | || | Sbjct 135196 GAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGT 135255 Query 79975 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 80034 | || || || | | |||| ||| || || || |||||| | || | | || Sbjct 135256 AGAACAAG-TCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAG 135314 Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094 | | | || | ||||| || || | ||| ||||| | | | || || || || || Sbjct 135315 TCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTG 135374 Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 || |||||||| | ||| | ||| || ||||| | || | | ||| || |||| || Sbjct 135375 CCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCG 135434 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTG 80212 ||||| || || ||||| || | || ||| ||| |||||||||| | | |||| Sbjct 135435 TTGGAGGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTG 135494 Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272 | |||| || || || || | || ||||| | || || || | || ||||| | Sbjct 135495 A--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATA 135552 Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332 | ||||| ||||| || || |||||| || | |||||| |||| ||| | || Sbjct 135553 TTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAG 135612 Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392 ||||| || || || | ||| || |||||||| ||||| || || | |||| |||| Sbjct 135613 GGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGAT 135672 Query 80393 TGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATT 80451 |||||||||| || || ||| ||||| | || ||||| || || || |||||||| Sbjct 135673 TGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGCATA 135731 Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTG-TTATTTATTTTCAACAAGTAAGATTTTTC 80510 | |||||| || || | |||| | | |||| || || || | || ||| ||| | || Sbjct 135732 AGCATGTGTTGGGGCCGTTCAGC-AACTTGATTGCCAATCTTGAGCAGGTATGATCTCTC 135790 Query 80511 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570 || || || ||||||||||| | ||| |||||||| ||||| | ||| | ||||| Sbjct 135791 CAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCAGAGTT 135850 Query 80571 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-GAAATAATCGGAGAAT 80629 || | ||| | | | | || |||| | | | | ||| || || ||||| || Sbjct 135851 GAACTCATCAGCGTGTCTCATGAC-ACATTCGTAGGTCTCCTTGGAGATCATCGGGGAGG 135909 Query 80630 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 80689 ||||| |||||| ||||| ||||||| | | | ||| | ||| |||| | | Sbjct 135910 GTTTCTGATTTTTCGGATTGACATAGTGGTAGAGGTCCGAGACCACGGAGGAAAATTGCT 135969 Query 80690 tttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTG 80749 | || || | ||||| || ||||| || || || | || || | | ||||| || | Sbjct 135970 TCTTGGTCTGTTTGTGGAGGTTTGAAACAGCGATACGTGCTGCGAGGACTGCATAGTCGG 136029 Query 80750 GATG 80753 |||| Sbjct 136030 GATG 136033 >seq2 Length=1089760 Score = 118 bits (130), Expect = 2e-21 Identities = 225/330 (68%), Gaps = 6/330 (2%) Strand=Plus/Plus Query 49953 CATCAAA---CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009 ||||||| || || || || ||||| |||||||| | | || || |||||||| Sbjct 279837 CATCAAAAGGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGA 279896 Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 || ||||| |||||||| || || | || ||||| || ||||| ||||| || || Sbjct 279897 GAAGGTGAGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCC 279956 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---C 50126 ||| |||||||| ||||| || || || || || || |||| | || | || | | Sbjct 279957 AGAGAAGAAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTC 280016 Query 50127 GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186 |||| |||||| ||||||| || || ||||| | ||||| || || || Sbjct 280017 TTTGTCTGATATCCATCGCAGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTC 280076 Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246 ||||| | || ||||| | || || || || || ||||| || || || | ||| Sbjct 280077 GATGGCGTCGAACAGATATGTCTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAG 280136 Query 50247 ACTATACATTTCCGAATGAATGTTTTCAAT 50276 || ||||||||||| || || || || || Sbjct 280137 GCTGTACATTTCCGAGTGGATATTCTCCAT 280166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264634040960