Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq17 154 2e-33
seq85 120 5e-23
>seq17
Length=408214
Score = 154 bits (170), Expect = 2e-33
Identities = 160/207 (77%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| ||| |||| |||||| || ||||||||||| ||||||||||| || ||
Sbjct 339782 GCTAAGCGTCACCGCAAGAT-TCTTCGCGACAACATCCAAGGTATCACCAAGCCTGCCAT 339840
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| ||||| ||||| || ||||||||| |||| | || |||| |||||||
Sbjct 339841 CCGACGTCTCGCTCGCCGTGGCGGTGTCAAGCGTATCTCGGCCATGATCTACGAAGAGAC 339900
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| |||||| | |||| || | ||| || || ||| |||||
Sbjct 339901 CCGCGGTGTCCTCAAGTCTTTCCTCGAATCCGTCATTCGTGACGCCGTCACCTACACCGA 339960
Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638
|||||| || | ||||||||||| ||
Sbjct 339961 GCACGCAAAGAGAAAGACTGTCACTTC 339987
>seq85
Length=184520
Score = 120 bits (132), Expect = 5e-23
Identities = 104/128 (81%), Gaps = 1/128 (1%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||| |||||| || ||||||||||| ||||||||||| || || || ||||| ||||||
Sbjct 43557 AGAT-TCTTCGTGACAACATCCAAGGTATCACCAAGCCCGCCATTCGACGTCTCGCTCGT 43615
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
|||||||| ||||||||| |||| | || |||| ||||||| |||| ||| | |||
Sbjct 43616 CGTGGTGGTGTCAAGCGTATCTCGGCCATGATCTACGAAGAGACCCGTGGTGTCCTCAAG 43675
Query 16568 ATCTTCCT 16575
| ||||||
Sbjct 43676 ACCTTCCT 43683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074775761552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |