Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq17 154 2e-33 seq85 120 5e-23 >seq17 Length=408214 Score = 154 bits (170), Expect = 2e-33 Identities = 160/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| ||| |||| |||||| || ||||||||||| ||||||||||| || || Sbjct 339782 GCTAAGCGTCACCGCAAGAT-TCTTCGCGACAACATCCAAGGTATCACCAAGCCTGCCAT 339840 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||| ||||| || ||||||||| |||| | || |||| ||||||| Sbjct 339841 CCGACGTCTCGCTCGCCGTGGCGGTGTCAAGCGTATCTCGGCCATGATCTACGAAGAGAC 339900 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| |||||| | |||| || | ||| || || ||| ||||| Sbjct 339901 CCGCGGTGTCCTCAAGTCTTTCCTCGAATCCGTCATTCGTGACGCCGTCACCTACACCGA 339960 Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638 |||||| || | ||||||||||| || Sbjct 339961 GCACGCAAAGAGAAAGACTGTCACTTC 339987 >seq85 Length=184520 Score = 120 bits (132), Expect = 5e-23 Identities = 104/128 (81%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| |||||| || ||||||||||| ||||||||||| || || || ||||| |||||| Sbjct 43557 AGAT-TCTTCGTGACAACATCCAAGGTATCACCAAGCCCGCCATTCGACGTCTCGCTCGT 43615 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 |||||||| ||||||||| |||| | || |||| ||||||| |||| ||| | ||| Sbjct 43616 CGTGGTGGTGTCAAGCGTATCTCGGCCATGATCTACGAAGAGACCCGTGGTGTCCTCAAG 43675 Query 16568 ATCTTCCT 16575 | |||||| Sbjct 43676 ACCTTCCT 43683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074775761552