Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq91 221 2e-52
seq2 114 2e-20
>seq91
Length=177601
Score = 221 bits (244), Expect = 2e-52
Identities = 749/1149 (65%), Gaps = 32/1149 (3%)
Strand=Plus/Plus
Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957
|| |||||||| || || || ||||||| | | ||| |||| | ||||||||||||
Sbjct 134901 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 134960
Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017
||||| | ||| || || || || | || || |||||| | || || || |||
Sbjct 134961 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 135020
Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077
|| || || || | || || |||||||| |||| | || | || || | ||| | |
Sbjct 135021 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATA-G 135079
Query 63078 ACTC-GAGCCTTTATTATA----GATTT-GTATCTCCTT----TCTCTTTCGTATAGTGT 63127
|| ||||||||| | || | |||||| | ||| |||||||| |
Sbjct 135080 TTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAGAG- 135138
Query 63128 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACA 63187
|||| ||||||||| || | || | | | | ||||| |||| |||||
Sbjct 135139 -------CGTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACA 135190
Query 63188 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63247
| | | ||| ||| || | || || |||| ||| || | |||||| |||| |
Sbjct 135191 GAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAT 135250
Query 63248 AGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63306
|| || || || || | | |||| || || || || |||||| | || | |
Sbjct 135251 GGCGTAGAACAAG-TCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCA 135309
Query 63307 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63366
|| | | | || | ||||| || || | ||| ||||| | | | || || || |
Sbjct 135310 AAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCT 135369
Query 63367 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63426
| || || |||||||| | ||| | ||| || ||||| | || | | ||| || ||||
Sbjct 135370 TATTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAA 135429
Query 63427 TACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACT 63484
||||| || | || ||||| || | || ||| ||| |||||||||| | |
Sbjct 135430 GCCCGTTGGAGGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGG 135489
Query 63485 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63544
||||| |||| || || || || | || ||||| | || || || | |||||
Sbjct 135490 CATTGA--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTC 135547
Query 63545 ATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63604
||| || ||||| ||||| || || |||||| || | |||||| |||| ||| |
Sbjct 135548 ATATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGG 135607
Query 63605 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63664
|| ||||| || || || | ||| || |||||||| ||||| || || | || |
Sbjct 135608 TTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACAT 135667
Query 63665 TAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACAC 63723
|||||||||||||| || || || ||||| | || ||||| || ||||| ||||
Sbjct 135668 GAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACAC 135726
Query 63724 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGAT 63782
|||| | |||||| || || | |||| | | |||| ||| || || | || ||| |||
Sbjct 135727 GCATAAGCATGTGTTGGGGCCGTTCAGC-AACTTGATTGCCAATCTTGAGCAGGTATGAT 135785
Query 63783 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63842
| |||| || || ||||||||||| | ||| |||||||| ||||| | ||| |
Sbjct 135786 CTCTCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCA 135845
Query 63843 GAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGG 63901
||||||| | ||| | | | | || | || | | | | ||| || || |||||
Sbjct 135846 GAGTTGAACTCATCAGCGTGTCTCATGAC-ACATTCGTAGGTCTCCTTGGAGATCATCGG 135904
Query 63902 AGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAA 63961
|| ||||| |||||| ||||| ||||||| | | | ||| | ||| |||
Sbjct 135905 GGAGGGTTTCTGATTTTTCGGATTGACATAGTGGTAGAGGTCCGAGACCACGGAGGAAAA 135964
Query 63962 TAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATA 64021
| | || || || | ||||| || ||||| || || || | || || || | |||||
Sbjct 135965 TTGCTTCTTGGTCTGTTTGTGGAGGTTTGAAACAGCGATACGTGCTGCGAGGACTGCATA 136024
Query 64022 ATCCGGATG 64030
|| |||||
Sbjct 136025 GTCGGGATG 136033
>seq2
Length=1089760
Score = 114 bits (126), Expect = 2e-20
Identities = 225/330 (68%), Gaps = 6/330 (2%)
Strand=Plus/Plus
Query 33297 CATCAAA---CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 33353
||||||| || || || || ||||| |||||||| | | || || ||||||||
Sbjct 279837 CATCAAAAGGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGA 279896
Query 33354 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33413
|| ||||| |||||||| || || | || ||||| || ||||| || || |||||
Sbjct 279897 GAAGGTGAGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCC 279956
Query 33414 AGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC 33472
||| |||||||| ||||| || || || || || | |||| | || | | || | |
Sbjct 279957 AGAGAAGAAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTC 280016
Query 33473 T--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33530
| ||| |||||| ||||||| || || ||||| | ||||| || || ||
Sbjct 280017 TTTGTCTGATATCCATCGCAGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTC 280076
Query 33531 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33590
||||| | || ||||| | || || || || || ||||| || || || | |||
Sbjct 280077 GATGGCGTCGAACAGATATGTCTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAG 280136
Query 33591 ACTATACATTTCCGAATGAATGTTTTCAAT 33620
|| ||||||||||| || || || || ||
Sbjct 280137 GCTGTACATTTCCGAGTGGATATTCTCCAT 280166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622943586906240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |