Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq91 345 1e-89 seq66 84.2 6e-11 >seq91 Length=177601 Score = 345 bits (382), Expect = 1e-89 Identities = 1166/1791 (65%), Gaps = 35/1791 (2%) Strand=Plus/Minus Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATA--- 363442 ||||||| || | |||||| |||||| ||| ||||| ||| | | ||| || Sbjct 135812 ATATTTT-GGTTTCAAGACGCTGGAGAGATCATACCTG-CTC--AAGATTGGCAATCAAG 135757 Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502 ||| |||||| || || || ||| | |||||||| || | ||||| || || ||| Sbjct 135756 TTGCTGAACGGCCCCAACACATGCTTATGCGTGTGGCAGTGGGTATTCACAGCGACGATA 135697 Query 363503 TTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCAC 363560 |||| || || || || || || || | || | | || || || ||||| | Sbjct 135696 TTGAAAAGGCCATCGAGACGTACAATCTCAT--GTCCCAGAAGTGCTTTACCCACGCTTC 135639 Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAA 363619 ||| || | | ||| || ||||| | | | || || |||| || || |||||| | Sbjct 135638 GCCCACCCTTTTCAACGCCGGAACCCCTCAACCTCAACTGTCCTCCTG-TTTCTTGATTG 135580 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | ||||| || || ||||||||| || | |||||| || |||| |||||| | || | Sbjct 135579 ACATGAAAGAAGACAGCATCGAGGGAATATATGACACCCTCAAGACTTGTGCCATGATCT 135520 Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGC-ACAGAACAGTT 363736 |||||| || || || |||||| | | || | || || ||||||| |||| | | Sbjct 135519 CCAAGACAGCTGGAGGTATTGGTCT--CAATGCCCATTGCATTCGTGCCACAGGATCCT- 135463 Query 363737 ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||||| ||||| || ||| || ||||| | ||||||||||| || || | | Sbjct 135462 ACATTGCAGGCACCAACGGCACCTCCAACGGGCTTATCCCCATGCTTCGCGTCTTCAATA 135403 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 ||||||| | |||||||| |||||||| |||||| ||| || ||||| || || | Sbjct 135402 ATACTGCTCGCTACGTCGATCAGGGTGGCAATAAGCGCCCAGGTGCTTTTGCCATCTACC 135343 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAA-- 363913 ||||||| || || || | || || ||| | | || | || ||| |||| || Sbjct 135342 TCGAGCCATGGCACGCAGACGTGTTCGACTTTTTGAACCTGAGAAAGAACCACGGCAAGG 135283 Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 |||||| | | ||||| || ||||||| || | ||| | ||||| || ||| Sbjct 135282 AAGAGG---TTAGAGCACGCGACTTGTTCTACGCCATGTGGACTCCTGACTTGTTCATGG 135226 Query 363974 AGCGCGTGGAGGC-AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTT 364032 | || || ||| | |||||| || | ||||| || || || || || || ||| Sbjct 135225 AACGTGTCGAGAAGAACCAAGAAT-GGACTCTCTTCTGTCCTCATGAGGCACCTGGCCTT 135167 Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092 |||| || | |||||||| | ||||||||||| | ||||| |||||| Sbjct 135166 GCCGACGTCTATGGTGACGAGTTCAACGCTCTATACGAGAGATATGAGAAGGAGGGCCGT 135107 Query 364093 GCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAG 364152 | ||| |||| | || ||||| ||||||| ||| ||| | || | |||| || Sbjct 135106 GGTCGCCAGACTGTAAAGGCTCAGAAACTATGGTATGCTATCCTCGAGGCACAGACCGAA 135047 Query 364153 ACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCAC 364212 || || || ||||||||| | ||||| || | ||||| | ||| ||||||| || || Sbjct 135046 ACTGGGACGCCCTATATGCTCTACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAAC 134987 Query 364213 CTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGA 364271 | || || | || | || ||| || || || |||||| | |||||||| |||||||| Sbjct 134986 TTGGGGACCA-TCCGAAGCTCCAATCTTTGCACTGAGATTGTCGAATACACGGCTCCCGA 134928 Query 364272 CGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGAT-- 364326 ||| || || || || || || || | || || ||| | || || ||| | Sbjct 134927 TGAGGTCGCTGTGTGCAATCTGGCCTCCCTGGCTCTCCCGACATTCGTCGACCAAGCTCG 134868 Query 364327 -GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGA 364385 ||| | |||| | | |||| |||| || || | || ||| |||| || | Sbjct 134867 AGGTGAATATGACTTCGGTCGTCTTCATGAGGTCACTCAGGTTGTGACTCGCAACCTAAA 134808 Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCA 364445 |||| ||||||| | || || || || | |||||||| || || | || || Sbjct 134807 CAAGATTATCGATATCAACTACTACCCTGTCCCTGAAGCGAAGAAGAGCAACTTCCGACA 134748 Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGC 364505 || || | ||||| || || || || ||||| |||| || | ||| | | Sbjct 134747 CCGACCCGTCGGTCTCGGAGTTCAAGGTCTCGCCGACGCCTTCCTTGCGCTGCGTCTTCC 134688 Query 364506 ATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGC 364565 || || || || || || | | |||| | ||||| || || || || ||| Sbjct 134687 TTTCGACTCTCCCGAGGCCAGGCAATTGAATATCCAAATCTTCGAGACCATCTACCATGC 134628 Query 364566 CGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG 364625 || | |||||||| ||||| ||||||| |||||| || || || || || Sbjct 134627 TGCTCTCACTGCTTCTTGTGAACTGGCAAAGGAGCAGGGAACATATGAAACATACGAAGG 134568 Query 364626 GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCG 364685 ||| | ||||| || | | || | || | ||||||||||| || || | | Sbjct 134567 CAGCCCAGTGTCGCAAGGCATTCTTCAATACGACATGTGGAATGTCACTCCCTCAGACTT 134508 Query 364686 ATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGT 364745 ||| | ||||| | | || | || || ||||||| ||||||||| ||| | Sbjct 134507 GTGGGATTGGGACGCCTTGAAAGCCGAGATTGCCAAACATGGTATTCGCAACTCTCTCCT 134448 Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805 | || ||||||||||| || || ||| | || |||||||| |||||||| |||||||| Sbjct 134447 TGTTGCTCCCATGCCCACTGCCTCGACTTCTCAAATCCTCGGCAACAACGAATGCTTCGA 134388 Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865 ||||| ||| ||| | || || ||||| || ||| |||| || || | ||| || || Sbjct 134387 ACCGTACACATCTAATATCTACTCTCGCCGTGTCCTTGCCGGTGAGTTCCAGGTTGTCAA 134328 Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTA 364925 | | || | |||||||| |||| || || ||| |||| |||||||| Sbjct 134327 TCCCTGGCTGCTGAAGGATCTCGTCGACTTGGGCCTATGGTCCGACAATATGAAGAATCG 134268 Query 364926 TATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCC 364985 |||||||||| || || | || ||||| || | || | || | || | Sbjct 134267 GATCATCGCCGAGGGCGGCTCGATCCAAAACATCCCCAACGTCCCTGCGGACATCAAAGC 134208 Query 364986 TATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCG 365045 | | ||||| |||||||||||||| | ||| || || | | ||||| || || || Sbjct 134207 TCTGTACAAGACCGTATGGGAAATCAGCCAGCGGACCGTCCTGCAAATGGCAGCGGACCG 134148 Query 365046 CGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGC 365105 ||||| || || ||| |||||| | ||| | | ||| | |||||| | Sbjct 134147 TGGTGCCTTCATTGACCAGTCCCAGTCTCTCAACATCCACTTGAAAGAACCAACCATGGG 134088 Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| | || |||||| || || |||||| ||||| ||||| || Sbjct 134087 CAAGATCACGAGCATGCACTTTGCAGGCTGGAAAATGGGTCTCAAGACCGG 134037 >seq66 Length=213812 Score = 84.2 bits (92), Expect = 6e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 111426 ATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTT-GTCGACAACGA 111484 || ||||| || || || || || || || || || |||||| || || ||| ||| Sbjct 202214 ATCTGGGACGGGAACGGCTCGCGAGAATTCCTCGACA-AGTTGGGATTCGTTGACCGCGA 202272 Query 111485 AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAA 111544 ||||| |||||||| || || |||||||||||||||||||| || || ||||| ||||| Sbjct 202273 GGAAGGAGATCTCGGCCCTGTCTACGGATTTCAATGGCGCCATTTCGGAGCAGAGTACAA 202332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345851562848