Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq91 129 6e-25 seq1 120 3e-22 seq2 109 5e-19 seq17 96.9 3e-15 seq51 89.7 5e-13 >seq91 Length=177601 Score = 129 bits (142), Expect = 6e-25 Identities = 596/927 (64%), Gaps = 23/927 (2%) Strand=Plus/Plus Query 145631 GACGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCAC 145690 || |||| ||| || || || ||| |||| | |||||| || ||||| | ||| Sbjct 134901 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 134960 Query 145691 AAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCC 145750 | |||| | | |||||| |||| || | ||| || || || || ||||| |||||| Sbjct 134961 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 135020 Query 145751 TTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCA 145808 ||||||||||| || || ||||| || ||| | ||| | |||| | || | | Sbjct 135021 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCAT--A 135078 Query 145809 AGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCT 145868 | ||| || || ||| | |||||||| | || ||| || ||| || Sbjct 135079 GTTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAGAG 135138 Query 145869 CCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCG 145928 | | ||| || ||| ||| |||| ||||| || || | ||||| | || | Sbjct 135139 CGTTGAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGAGAG 135198 Query 145929 ACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACA 145988 |||| | ||| | ||| || ||||| ||||| || || ||||| ||||| | Sbjct 135199 TCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGA 135258 Query 145989 TCAAGTCGCGCGCTTTGCAATCCTCAGCAC--CCATGTTTCGCT-TCAAATT-AAGCACA 146044 ||||||||| ||| | | |||| | || || ||| | ||| || || | Sbjct 135259 ACAAGTCGCGTGCTCT---AACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGT 135315 Query 146045 CTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---G 146101 | | | | ||| |||||||| || || | |||| ||| | || ||| || || | Sbjct 135316 CGA-ACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTG 135374 Query 146102 CCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCG 146161 |||||||| || |||| || | | || || |||||||| | |||||| | ||| Sbjct 135375 CCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCG 135434 Query 146162 CTGGCTACGCCGTTCGTAGAGTTTATTCT-GGTGCCGCGGGAGCGCACGCAATGAACATT 146220 ||| |||||| || | | | | | || || || || | |||||| |||| Sbjct 135435 TTGGAGGTGCCGTTGGT-GCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATT 135493 Query 146221 CACGCCGAGACCGCC-GCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAG 146278 | || | ||| || || || |||||| || ||| || ||| ||| || || || Sbjct 135494 GAGACCAATACCTCCAGCTGT-CTTGGAGATCATGGCACAAGTCTT-GAGGGTGTCATAT 135551 Query 146279 ATGCCGTCAATGCTATCGCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATC 146338 || || || ||||| || | ||| | | || || || ||| ||| || | Sbjct 135552 ATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGA 135611 Query 146339 GGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCAT 146397 || || || || ||| | || || ||||| ||||| || || | || ||| | Sbjct 135612 GGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGA-CATGAG 135670 Query 146398 CCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCAT 146457 ||||| ||||| || | || ||| ||||||| ||||| |||| || || ||||| Sbjct 135671 ATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACACGCAT 135730 Query 146458 GAGCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTC 146517 ||||||||||||||||| || || ||||||||| ||||||| | || || |||| Sbjct 135731 AAGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTC 135790 Query 146518 CAGGGTTTTGTATCCGAAAAATTTGTA 146544 ||| || ||| | || ||| ||| ||| Sbjct 135791 CAGCGTCTTGAAACCAAAATATTGGTA 135817 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 12/232 (5%) Strand=Plus/Plus Query 145056 GATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGG 145115 ||||||| ||||| ||||| ||||| | ||||| || | || | ||||| ||| | | Sbjct 134326 GATTGACAACCTGGAACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACG 134385 Query 145116 GTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCA 145175 |||| || | ||||| ||||| |||||||||| |||| || ||||||||| || | Sbjct 134386 GTTCGAAGCATTCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAA 134445 Query 145176 CCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTA--GCGTACCCCAATC 145233 | | | || ||||| | || || || || || | || | |||| ||||||| Sbjct 134446 CAAGGAGAGAGTTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGT--CCCAATC 134503 Query 145234 CCATAGCGAAGTC----GGCCTCACGTCCCACATGTCGTACTGCAAAATGCC 145281 ||| | |||| || | || | |||||||||||| || | |||||| Sbjct 134504 CCACA----AGTCTGAGGGAGTGACATTCCACATGTCGTATTGAAGAATGCC 134551 >seq1 Length=1383374 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | || | |||||||||||| || |||||||| ||| Sbjct 701587 GCCGCCACGGAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 701528 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||| || || |||||||| ||| |||| | |||||||||||||| || Sbjct 701527 CAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 701468 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || |||| | || | || ||| ||||||||| Sbjct 701467 GATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCGAC 701408 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || || || || ||||| || |||||| Sbjct 701407 CTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTCACGAAGATTTGCATG 701359 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | || ||||| | ||| | ||||| ||||| || |||||||| || Sbjct 701814 CCGCCGCGGAGCCGGAGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAG 701755 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||||||||| |||| | ||||||||||| || ||| Sbjct 701754 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 701695 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || ||| | || || | Sbjct 701694 ATCCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGCTCGATTCAACC 701635 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || || || || || || |||||||| || |||||| Sbjct 701634 TCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCATG 701587 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| | |||||| || || | || |||||| || |||||||| ||||| Sbjct 702043 GCCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCT 701984 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || ||| |||||| | ||||||||| ||| | || | ||||||||||||||||| Sbjct 701983 GAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGG 701924 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| ||| ||||| | || | || || | | ||| | Sbjct 701923 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCAC 701864 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || || || || || |||||||| || ||||| Sbjct 701863 CTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816 >seq2 Length=1089760 Score = 109 bits (120), Expect = 5e-19 Identities = 270/404 (67%), Gaps = 7/404 (2%) Strand=Plus/Minus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCG-C 46142 || || ||| | ||||||||| | |||||||| || ||||| | ||| | | | Sbjct 280070 ATCCCTTGCATTCGCAAGAAAGCAGACTGGGCTCTGCGATGGAT-ATCAGACAAAGAGTC 280012 Query 46143 GACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAG 46202 || || ||| | || | ||||| || || || || ||| |||| || ||||| Sbjct 280011 GAGCTTTGCCCAACGACTAGTGGCTTTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATC 279952 Query 46203 TTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 ||||| ||||||| | | || | ||| || | ||||||||||| || || ||| Sbjct 279951 CTTTGCATCCATCTTCTGGCTGAAGAGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAA 279892 Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTC-TCTACTATAACA 46321 |||||| || || || ||||||||| |||| |||||||||||||| | | | | |||| Sbjct 279891 CGAGCTCATCTCTCGTGACGAGGGCATGCACACGGACTTTGCGTGCCTTTTGATGCAACA 279832 Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGG 46381 || |||| |||||| | || | | | | ||| | | || || || Sbjct 279831 -TC---TGCAGCACAAGCCGGACCCACAACTCATCGAAAACATTATAACCGAAGCCGTCA 279776 Query 46382 CCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCAC 46441 || || ||||| || | || | || || |||| || ||||| ||||||||| | Sbjct 279775 GGATCGAAAAGGAATTCCTCACCGATGCCCTCCCCGTCGCACTGCTCGGCATGAACTCGA 279716 Query 46442 AGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTC 46485 || ||||| | ||||| |||||||| || ||||| |||||| Sbjct 279715 AGCTCATGTGTCAGTACATTGAGTTTGTTGCTGACCGTCTGCTC 279672 >seq17 Length=408214 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| || || || || || |||||||| ||| ||| Sbjct 190086 CCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGA 190027 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||||||||| || ||||| ||||| ||||| ||| || ||||| | | Sbjct 190026 TCAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGT 189967 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| ||||||| || | ||| | ||| || || || || || || |||| Sbjct 189966 CGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 189907 Query 131225 A 131225 | Sbjct 189906 A 189906 >seq51 Length=241757 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||| || | || | |||||| ||||| || |||||||| ||| Sbjct 20505 CCACCGCGAAGACGCAAGACCAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAG 20446 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || || |||||||| ||| |||| | || ||||||||||| || Sbjct 20445 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGGGGA 20386 Query 131128 ATTCCTTCTTTGTC 131141 || ||||| ||||| Sbjct 20385 ATGCCTTCCTTGTC 20372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010062325760