Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=1089760 Score = 107 bits (118), Expect = 2e-18 Identities = 324/492 (66%), Gaps = 14/492 (3%) Strand=Plus/Plus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986 ||||| ||||| || ||||||||| |||| | | | ||||| || || || || Sbjct 279682 TCAGCAACAAACTCAATGTACTGACACATGAGCTTCGAGTTCATGCCGAGCAGTGCGACG 279741 Query 92987 GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTATT 93046 || || || ||||| | ||| || || ||||| |||||||| | | || | | Sbjct 279742 GGGAGGGCATCGGTGAGGAATTCCTTTTCGATCCTGACGGCTTCGGTTATAATGTTT--- 279798 Query 93047 ACTCTACTATTTGGTGGTTT---TTGTACGACATAA-TTGTA-CATTAAGCACGCAAAGT 93101 || | | ||| ||| |||| | || | ||| | || | ||||||||||| Sbjct 279799 --TCGATGAGTTGTGGGTCCGGCTTGTGCTGCAGATGTTGCATCAAAAGGCACGCAAAGT 279856 Query 93102 CGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACA 93161 | || || | || ||||| || || || | ||| ||| ||| || | || || | || Sbjct 279857 CCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCA 279916 Query 93162 GTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCA 93221 ||||| |||| ||||| || || || ||||| ||||| || || || ||||| | Sbjct 279917 GTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAAGATGCCTTCGA 279976 Query 93222 CGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG-CGGAATTACTGCTGATCCATTTT 93280 ||||||| || ||||| | |||| |||||| | | | | ||| | |||||| Sbjct 279977 CGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCTGAT-ATCCATCGC 280035 Query 93281 AAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTA- 93339 | |||||| || ||||| || ||| ||||| | ||| ||||| |||| || || || Sbjct 280036 AGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTCGATGGCGTCGAACAGATAT 280095 Query 93340 ATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATG 93399 ||| ||| | | || || || || || || | || |||||||| || || Sbjct 280096 GTCT-TCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAGGCTGTACATTTCCGAGTG 280154 Query 93400 GACATTCTCCAT 93411 || ||||||||| Sbjct 280155 GATATTCTCCAT 280166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857570207360