Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq91 239 8e-58 seq2 150 3e-31 >seq91 Length=177601 Score = 239 bits (264), Expect = 8e-58 Identities = 1089/1702 (64%), Gaps = 81/1702 (5%) Strand=Plus/Plus Query 243760 GGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAG 243819 ||| ||| | || | |||||||||||||||||||||||| || | |||| | | Sbjct 134009 GGCCGCCATCGTGCGCAGGTAGTACATGCCGGTCTTGAGACCCATTTTCCAGCCTGCAAA 134068 Query 243820 GTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTT 243879 ||||||| ||| | ||| ||| || | || || || || || ||| Sbjct 134069 GTGCATGCTCGTGATCTTGCCCAT----------GGTTGGTTCTTTCA-AGTG-GATGTT 134116 Query 243880 GAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGA-GGTCCT 243938 ||| |||||| |||||| | ||||| | || || || ||||| | || ||||| Sbjct 134117 GAGAGACTGGGACTGGTCAATGAAGGCACCACGGTCCGCTGCCATTTGCAGGACGGTCCG 134176 Query 243939 TCTGA--GATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTC 243996 ||| ||| || |||||| |||||||| | | |||| || | | |||| | || Sbjct 134177 -CTGGCTGATTTCCCATACG--GTCTTGTACAGAGCTTTGATGTCCGCAGGGA--CGTTG 134231 Query 243997 G--ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCAC 244054 | ||||| || | |||||| | | |||||| | | | ||| || ||| ||| Sbjct 134232 GGGATGTTTTGGATCGAGCCGCCCTCGGCGATGATCCGATTCTTCATATTGTCGGACCAT 134291 Query 244055 AGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCACCACCTGAAACTCTCCC 244111 ||||||||| | || ||| | ||| || | || || ||||| ||||| || Sbjct 134292 AGGCCCAAGTCGACGAGATCCTTCAGCAG---CCAGGGATTGACAACCTGGAACTCACCG 134348 Query 244112 GACAGCACGCGGCGCTGGTAGAGGTT-GCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170 | || || ||||| ||||| || | || || ||| |||| || || ||||||| Sbjct 134349 GCAAGGACACGGCGAGAGTAGATATTAGATG-TGTACGGTTCGAAGCATTCGTTGTTGCC 134407 Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230 || || || | || ||||| |||||||| | || || ||| ||| | | || Sbjct 134408 GAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAGTTGCGAATACC 134467 Query 244231 GTGCCTCTGG--ATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCG 244288 || | ||| || | | | | ||| ||| ||||||| | | ||| | Sbjct 134468 ATG--TTTGGCAATCTCGGCTTTCAAGGCGTCCCAATCCCACAAGTCTGAGGGAG----- 134520 Query 244289 CGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTG-ACGGGGCTGCCCTCGTA 244347 ||| ||||||||| | || || | || |||| || |||||||| ||||| Sbjct 134521 ----TGACATTCCACATGTCGTATTGAAGAATGCC-TTGCGACACTGGGCTGCCTTCGTA 134575 Query 244348 GGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTA 244407 || || | || | || ||||| | ||| | ||| || || | ||| Sbjct 134576 TGTTTCATATGTTCCCTGCTCCTTTGCCAGTTCACAAGAAGCAGTGAGAGCAGCATGGTA 134635 Query 244408 GATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCC 244467 ||||||||||||||| | |||| | | ||||| | || ||| || | | Sbjct 134636 GATGGTCTCGAAGATTTGGATATTCAATTGCCTGGCCTCGGGAGAGTCGAAAGGAAGACG 134695 Query 244468 CATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTT 244527 || | | |||| ||||||| || || || || |||| |||| ||||| |||||| Sbjct 134696 CAGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGAA 134755 Query 244528 GTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTT 244587 |||| | | ||||| || || ||||| ||||| ||||| | |||||| ||||| Sbjct 134756 GTTGCTCTTCTTCGCTTCAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTAGGTT 134815 Query 244588 GCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCT 244646 ||| || | || | || ||| || || | ||||| || || || | | Sbjct 134816 GCGAGTCA-CAACCTGAGTGACCTCATGAAGACGACCGAAGTCATATTCACCTCGAGCTT 134874 Query 244647 CGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCA 244706 | ||| | || ||| ||| || | | |||||| ||||| || || | Sbjct 134875 GGTCGACG-----------AATGTCGG-GAGAGCCAGGGAGGCCAGATTGCACACAGCGA 134922 Query 244707 CCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGC 244766 |||| || | ||||| | ||||||||| ||||| || || || |||||| | Sbjct 134923 CCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCC 134982 Query 244767 CCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCC 244826 ||| || || || ||| ||| ||||||||||||||||||||||| ||||| || Sbjct 134983 CCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCC 135042 Query 244827 CGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGC 244886 | || ||| ||| || |||||| | ||| || | | |||||| || ||| || Sbjct 135043 CAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATAGTTTCTGAGCCTTTACAGTCTGGC 135102 Query 244887 GAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCT 244946 || | |||||| ||| || | ||| || || | ||||||| || |||| | Sbjct 135103 GACCACGGCCCTCCTTCTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGT 135162 Query 244947 CGTCTAGGCC-GGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACC 245005 || | ||||| || || | | || || | |||| |||| || | | || ||| Sbjct 135163 CGGCAAGGCCAGGTGCCTCATG-AGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGACA 135221 Query 245006 CTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCT--GCT 245063 | | |||||| | ||| || |||| | ||| | ||| | ||| | || |||| || Sbjct 135222 CGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGC--GTGCTCTAACCT 135279 Query 245064 CGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCT 245123 | ||| ||| |||||| ||||| | ||||||||| || ||||| ||||||| |||| Sbjct 135280 CTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCT 135339 Query 245124 CCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGA 245183 | | ||||| || | || || || ||||| ||||| ||||| || | | | ||| Sbjct 135340 CGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGA----CGTAGCGA 135395 Query 245184 GC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCC 245239 || ||||||| ||| || | || | | ||||| ||| |||||||||||| Sbjct 135396 GCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCGTTGGTGCCT 135455 Query 245240 TTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGCCGGC 245295 ||||||| || || | | | ||| |||| ||| || | || || || Sbjct 135456 GCAATGTAGGATCCTGTGGCAC---GAATGC-AATGGGCATTGAGACCAATACCTCCAGC 135511 Query 245296 GTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGA 245355 ||||||||| | ||| || |||||| |||||| ||| ||||| |||||||| Sbjct 135512 TGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATGCTGTCTTC 135571 Query 245356 CTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAG 245415 ||||||| | || || ||||||||||| || || | ||| | | | |||||| || Sbjct 135572 TTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAAG 135631 Query 245416 AGTGGGGCTGGCGTGGGTAAAG 245437 ||||| |||||||||||| Sbjct 135632 GGTGGGCGAAGCGTGGGTAAAG 135653 >seq2 Length=1089760 Score = 150 bits (166), Expect = 3e-31 Identities = 294/427 (69%), Gaps = 13/427 (3%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||| | ||||| || || || || ||||| ||||| || |||||||| || Sbjct 280091 CTGTTCGACGCCATCGACACAATCCCTTGCATTCGCAAGAAAGCAGACTGGGCTCTGCGA 280032 Query 42669 TGGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 ||||| || | || | | || | | | | || || || || | |||||||| Sbjct 280031 TGGATATC-AGACAAAGAGTCGAGCTTTGCCCAACGACTAGTGGCTTTCGCAGCCGTCGA 279973 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG--AAGGTGTCG 42785 |||||||||||||| || |||| || |||||||||||||| ||| || |||| | | Sbjct 279972 AGGCATCTTCTTCTCTGGATCCTTTGCATCCATCTTCTGGCTGAAG-AGCAAAGGACT-G 279915 Query 42786 ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGAC 42845 |||||||| ||||||||||| ||||| |||||| | |||||||| |||| | |||| Sbjct 279914 ATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCACACGGAC 279855 Query 42846 TTTGCCTGCCTCCTGTTCTCGAGCCACCTCAG--GCACAAGCCCTCGAAGGAGCGGGTCC 42903 ||||| ||||| || | || || || | ||||||||| | | || Sbjct 279854 TTTGCGTGCCTTTTGAT-----GCAACATCTGCAGCACAAGCCGGACCCACAACTCATCG 279800 Query 42904 GGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCG 42963 ||| || || || ||||| |||||| ||||| |||||||| | | || |||| Sbjct 279799 AAAACATTATAACCGAAGCCGTCAGGATCGAAAAGGAATTCCTCACCGATGCCCTCCCCG 279740 Query 42964 TGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 | | ||| ||||||||||| | |||||||| ||||||| ||| || || |||| Sbjct 279739 TCGCACTGCTCGGCATGAACTCGAAGCTCATGTGTCAGTACATTGAGTTTGTTGCTGACC 279680 Query 43024 ATCTCCT 43030 ||| || Sbjct 279679 GTCTGCT 279673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333722832640