Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq26 95.1 3e-14
seq36 87.8 4e-12
>seq26
Length=352299
Score = 95.1 bits (104), Expect = 3e-14
Identities = 357/553 (65%), Gaps = 8/553 (1%)
Strand=Plus/Minus
Query 297169 ACCTTTGAATCCTCGATACCACGGTTTCATTT-CGACGAGATCTTCTCCAGCAATCAATC 297227
|||||||||||| || |||| || | ||| | | || ||||| || || || |
Sbjct 282905 ACCTTTGAATCCGCGGAACCAGGGCTGCATAGGCTTCCAG-TCTTCGCCGGCCATTCTGC 282847
Query 297228 GCTTCACGTTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGG 297287
| || | |||||| ||||| |||| ||||||||| | |||||| || ||| || |
Sbjct 282846 GTTTGAGGTTGTCCACGATATCTTCTGGATTGTAGTTGGGGATAGAAGAACTCCAGCCCG 282787
Query 297288 TACCGATTCCACTCGAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTG 297347
| || || || | |||||| || || | | || | | || || || ||| |
Sbjct 282786 TGCCAATACCGTCAGCACCATTGACGAGGACCATTGGGACGATCGGTACGTATACCTCGG 282727
Query 297348 GTTCGATCTTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCCGTATCGACGA 297407
| |||||||| | | |||||||| ||| |||||| || || | | | |
Sbjct 282726 GCTCGATCTTCTTGTCATCATCATAGTTATAGGACAGAAGGGGTTCATCGGCTTGGTGAA 282667
Query 297408 AAACCTGTC--GAGTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATC 297465
| | || | | | || | | || |||||||| ||||| || || || |||
Sbjct 282666 ACAGCTTCCTTGCGAATGGCGAT--AGACGGGTGAAAATGTATCGAGCGCTTGCAGAATC 282609
Query 297466 CTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATT 297525
| || ||||| || | ||| || ||||| ||| |||| |||||| || ||
Sbjct 282608 GCTGCCGCCCTGGTTTCGGGTACCAAATTGGCCTGAGGGCTCCAACAAGTTGACATTGTT 282549
Query 297526 GCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATG 297585
||||||| | || || ||| || || ||| || ||||||| ||| |||||
Sbjct 282548 CGATCCGACAAAGCTTTGGGCCAGGCCGACAATCGTCTGCTGGAGAGATGTTTCACCATG 282489
Query 297586 GTGATAGGCGCT-ATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCG 297644
|||||| ||| | || | | | || |||| | || |||||||||| || |
Sbjct 282488 GTGATACGCGGTCATAC-CACCGACCAAACCCGCCAGCTCGGCAACCTTCATATCCTTTT 282430
Query 297645 TCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAA 297704
||| |||||||||||| || ||| || ||||| || ||| ||| || | ||||||||
Sbjct 282429 TCAGATTGCGCTTGAAGCATGCATACATGACTTTTCGCTGACCAGGCTTTAGACCATCAA 282370
Query 297705 CGACCGACGGAAT 297717
| || || || ||
Sbjct 282369 CTACTGAGGGGAT 282357
>seq36
Length=294547
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/202 (71%), Gaps = 3/202 (1%)
Strand=Plus/Minus
Query 332810 AATGATCACGACACCTCCACCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGACTCTC 332869
|||||| |||||||| || | || | ||| || || | || | || || | ||
Sbjct 183746 AATGATGACGACACCACCCTCGAACTCCTTCAGAGCCTTGGAAAGAGCACCCAACGAATC 183687
Query 332870 ACGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGTTGTTGCCATAGAGC 332929
|||||||| | ||||||| ||||||||||||||||||| || || ||||||| | ||
Sbjct 183686 ACGGTCAAGGTAGTTGGTGGGTTCGTCCAAAACGATCAAATGAGG-CGTTGCCA-CGTGC 183629
Query 332930 -AGCGCCGATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATGAG 332988
|||| | | ||| | || | || || ||||| |||||||| ||||| || || |
Sbjct 183628 AAGCGGCAAGAACGACCTTGACACGCTGACCACCAGACAGACCACGCATGCGGGAGTGGG 183569
Query 332989 TTGTAAATTCAGGGTCGAGACC 333010
| ||||||| ||||||||
Sbjct 183568 AGATCAATTCAGCATCGAGACC 183547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102873443378400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |