Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 2e-23
seq91 116 4e-21
seq112 93.3 4e-14
seq51 86.0 6e-12
>seq1
Length=1383374
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||||||||| | | ||||| ||||| | ||||||||| || || |||||||| || |
Sbjct 701815 ACCGCCGCGGAGCCGGAGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGA 701756
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| |||| || ||||||||||| ||| | || || |||||||||||||| ||
Sbjct 701755 GAGCGTGCGGCCGTCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCGGGCGG 701696
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || || || || || ||| || || | || || | | || ||
Sbjct 701695 GATCCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGCTCGATTCAAC 701636
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| || | || |||||||| ||||||||
Sbjct 701635 CTCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701588
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
||||| |||| ||| ||||| | || | ||| || || || |||||||| || |
Sbjct 702042 CCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 701983
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || ||| |||| || | ||||||||| || |||| |||||||||||||| ||||||
Sbjct 701982 AGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGA 701923
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || || || || || ||| || || | || || | |||||
Sbjct 701922 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACC 701863
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| || | || |||||||| ||||||||
Sbjct 701862 TCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || |||||||| || | | |||||| ||||||| || |||||||||
Sbjct 701556 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCCG 701497
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || || ||||||||||| || || || || || || || || || || ||
Sbjct 701496 GCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGATTTG 701437
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || || | || || || || | || | ||||||||| || | ||
Sbjct 701436 ACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTC 701377
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| ||||||||
Sbjct 701376 TTCACGAAGATTTGCAT 701360
>seq91
Length=177601
Score = 116 bits (128), Expect = 4e-21
Identities = 352/532 (66%), Gaps = 19/532 (4%)
Strand=Plus/Plus
Query 154905 ACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTTTTG 154964
|| |||| ||| ||||| || || ||||| ||||| ||||| || || || |
Sbjct 135219 ACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACC 135278
Query 154965 TCTTCAGCGCCCATGTTTCGCTTTAAA-TTCAAAAAATCATATATGTCGGCGTGCCACGG 155023
||||| ||| || ||| | | | |||||||| || | | ||| |||||||| ||
Sbjct 135279 TCTTCCTTGCCG-TGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGG 135337
Query 155024 CTCTAAATATACGGCCATCGCGCCTTTGCGTTTT---CCTCCTTGATCCACGTGACGCAC 155080
||| | || | ||| | || ||| ||| || || || ||||| |||| || |
Sbjct 135338 CTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACGTAGCGAGC 135397
Query 155081 ACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGCC--- 155137
| ||||||| | ||||| | || || | ||| ||| ||||||||||||||
Sbjct 135398 AGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCGTTGGTGCCTGC 135457
Query 155138 -ACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAAACCTCC-GCCG 155195
| ||| ||| || | | || ||| |||| | || | |||||| || |
Sbjct 135458 AATGTAGGATCCTGTGGCACGAATGCA----ATGGGCATTGAGACCAATACCTCCAGCTG 135513
Query 155196 TATTT-AGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTC 155254
| || |||| | || || |||| | || || || ||||| | ||||||||||||
Sbjct 135514 TCTTGGAGATCATGGCACA-AGTCTTG-AGGGTGTCATATATTCCCTCGATGCTGTCTTC 135571
Query 155255 TTTCAACGTCAA-CAAGAAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATA 155313
|||| | ||||| ||||||||| || || | ||||||||||||| ||||| || |
Sbjct 135572 TTTC-ATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAA 135630
Query 155314 ATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGG 155373
|| || |||||| ||||| || | || | | ||||| || ||||||||
Sbjct 135631 GGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTGTACGTCTCGATGGCCT 135690
Query 155374 CGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTG 155425
||||| || | ||| ||||| | ||||| ||||| |||||||||||
Sbjct 135691 TTTCAATATCGTCGCTGTGAATACCCACTGCCACACGCATAAGCATGTGTTG 135742
>seq112
Length=144762
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | |||| ||||| | ||||||||| || || |||||||| || | |
Sbjct 45873 CCGCCGCGGAGGCGGGGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAG 45932
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| |||| || ||||||||||| ||| | || || ||||||||||||| |
Sbjct 45933 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGATGTG 45992
Query 64337 ATTCCTTCTTTTTC 64350
|| ||||| || ||
Sbjct 45993 ATCCCTTCCTTGTC 46006
>seq51
Length=241757
Score = 86.0 bits (94), Expect = 6e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|||||||| || || |||||||| || | || ||||| ||||||| || |||||||||
Sbjct 20475 GTCGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCG 20416
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | || || || |||||||| || ||||| ||||| || |||
Sbjct 20415 GCGAAGATCAGGCGTTGCTGGTCCGGGGGAATGCCTTCCTTGTCT 20371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499641902060160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |