Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq91 302 4e-77 >seq91 Length=177601 Score = 302 bits (334), Expect = 4e-77 Identities = 1083/1672 (65%), Gaps = 40/1672 (2%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | || |||| ||||| || ||||||| || ||||| |||||||| |||| Sbjct 135820 AACTACCAATATTTTGGTTTCAAGACGCTGGAGAGATCATACCTGCTCAAGAT---TGGC 135764 Query 93775 AGG---GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGC 93831 | ||| | || || || || || |||| ||||| || || | || |||||| || Sbjct 135763 AATCAAGTTGCTGAACGGCCCCAACACATGCTTATGCGTGTGGCAGTGGGTATTCACAGC 135704 Query 93832 CACGACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG 93891 |||| || || | | | | | || |||| | ||| | | |||| Sbjct 135703 GACGATATTGAAAAGGCCATCGAGACGTACAATCTCATGTCCCAGAAGTGCTTTACCCAC 135644 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 || | || ||||| |||||||| || ||||| || || |||| || |||||| || Sbjct 135643 GCTTCGCCCACCCTTTTCAACGCCGGAACCCCTCAACCTCAACTGTCCTCCTGTTTCTTG 135584 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 || ||| | || | ||| |||| ||||| | |||| ||||||| ||||| | Sbjct 135583 ATTGAC-ATGAAAGAAGACAGCATCGAGGGAATATATGACACCCTCAAGACTTGTGCCAT 135525 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||||| || || || || || || ||| || ||| | | ||||||| || || Sbjct 135524 GATCTCCAAGACAGCTGGAGGTATTGGTCTCAATGCCCATTGCATTCGTGCCACAGGATC 135465 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| || ||||| |||||||||||||| || |||| ||||| || |||||||| Sbjct 135464 CTACATTGCAGGCACCAACGGCACCTCCAACGGGCTTATCCCCATGCTTCGCGTCTTCAA 135405 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 || | || |||||||| || |||||||| | | | ||| |||| || |||| Sbjct 135404 TAATACTGCTCGCTACGTCGATCAGGGTGGCAATAAGCGCCCAGGTGCTTTTGCCATCTA 135345 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 |||||||| |||||||| |||||| | || | ||||| |||||||||||||||| Sbjct 135344 CCTCGAGCCATGGCACGCAGACGTGTTCGACTTTTTGAACCTGAGAAAGAACCACGGCAA 135285 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || || || | ||| | |||||||| | ||| || ||| | || ||| | Sbjct 135284 GGAAGAGGTTAGAGCACGCGACTTGTTCTACGCCATGTGGACTCCTGACTTGTTCATGGA 135225 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 ||| |||||||| ||| | |||| ||| || ||||| |||| || || || | Sbjct 135224 ACGTGTCGAGAAGAACCAAGAATGGACTCTCTTCTGTCCTCATGAGGCACCTGGCCTTGC 135165 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAAGG 94429 |||||| | ||| | || || || || | || | | || || | ||||| | Sbjct 135164 CGACGTCTATGG-TGACGAGTTCAACGCTCTATACGAGAGATATGAGAAGGAGGGCCGTG 135106 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | || | | | ||| ||| || ||| || ||| | || | |||| || | Sbjct 135105 GTCGCCAGACTGTAAAGGCTCAGAAACTATGGTATGCTATCCTCGAGGCACAGACCGAAA 135046 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || |||||||| || | | ||||||| | ||| ||| ||||||| || || Sbjct 135045 CTGGGACGCCCTATATGCTCTACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAACT 134986 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | ||| ||| ||||| ||||| ||||| ||||||||||| || || |||| || | Sbjct 134985 TGGGGACCATCCGAAGCTCCAATCTTTGCACTGAGATTGTCGAATACACGGCTCCCGATG 134926 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA-GATGC-CTA 94667 || | |||||||| || |||| |||| | || | || ||||| ||| | || | | Sbjct 134925 AGGTCGCTGTGTGCAATCTGGCCTCCCTGGCTCTCCCGACATTCGT-CGACCAAGCTCGA 134867 Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG-GTCT 94726 | || ||||| ||| ||| | ||| | ||| ||| || | || Sbjct 134866 GGTGAATATGACTTCGGTCG-TCTTCATGAGGT----CACT-------CAGGTTGTGACT 134819 Query 94727 TG-AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785 | ||||| |||| | | ||||| | |||| |||||| ||||| || ||| |||| Sbjct 134818 CGCAACCTAAACAAGATTATCGATATCAACTACTACCCTGTCCCTGAAGCGAAGAAGAGC 134759 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| | || || ||| |||| |||| || || ||| |||| ||||| | | | Sbjct 134758 AACTTCCGACACCGACCCGTCGGTCTCGGAGTTCAAGGTCTCGCCGACGCCTTCCTTGCG 134699 Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905 ||||||| || | ||||||| ||| || | |||||| | | || ||||| | | Sbjct 134698 CTGCGTCTTCCTTTCGACTCTCCCGAGGCCAGGCAATTGAATATCCAAATCTTCGAGACC 134639 Query 94906 ATTTATTACGGGGCCATGAAACAATC-CGTCCACTTGGCCAGATCGGACGGCGGGCCACA 94964 || || | | || | | || || || |||| | ||| || || | Sbjct 134638 ATCTACCATGCTGCTCTCACTGCTTCTTGTGAAC-TGGC---AAAGGAGCAGGGAACATA 134583 Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 ||| | | | || || || || |||||| |||| | |||| | ||| ||| Sbjct 134582 TGAAACATACGAAGGCAGCCCAGTGTCGCAAGGCATTCTTCAATACGACATGTGGAATGT 134523 Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGT 95084 | ||||| | ||| || ||||| || | || || || |||||| ||| | Sbjct 134522 CACTCCCTCAGACTTGTGGGATTGGGACGCCTTGAAAGCCGAGATTGCCAAACATGGTAT 134463 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 ||| | || ||||| || ||||||||||| ||||| || | || ||||| ||||| Sbjct 134462 TCGCAACTCTCTCCTTGTTGCTCCCATGCCCACTGCCTCGACTTCTCAAATCCTCGGCAA 134403 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 |||||| | |||||||| | ||| || || | ||| | || || || ||||| || Sbjct 134402 CAACGAATGCTTCGAACCGTACACATCTAATATCTACTCTCGCCGTGTCCTTGCCGGTGA 134343 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTG 95263 |||| || |||| || || ||| || | || || |||| | ||| | Sbjct 134342 GTTCCAGGTTGTCAATCCCTGGCTGCTGAAGGATCTCGTCGACT-TGGGCCTATGGTCCG 134284 Query 95264 ACAAGGTCAAGAACCAACTGCTACGCGCCAA---CGGCTCCGTCCAGAACATCCCGCAAA 95320 |||| | |||| | | | | |||| | |||||| |||| |||||||| | Sbjct 134283 ACAATATGAAGA---ATCGGATCATCGCCGAGGGCGGCTCGATCCAAAACATCCCCAACG 134227 Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 | || | ||||||||| || || ||||||||||| ||||| ||| ||||| Sbjct 134226 TCCCTGCGGACATCAAAGCTCTGTACAAGACCGTATGGGAAATCAGCCAGCG 134175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720330605440