Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq91 224 1e-53 seq1 109 5e-19 seq2 107 2e-18 >seq91 Length=177601 Score = 224 bits (248), Expect = 1e-53 Identities = 963/1504 (64%), Gaps = 31/1504 (2%) Strand=Plus/Plus Query 153030 TTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGT 153089 ||||| || || ||||| || || | || || | | || | ||| ||| | ||| Sbjct 134328 TTGACAACCTGGAACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACGGT 134387 Query 153090 TCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACC 153149 || ||| ||||||| ||||| || ||||||| || | || || |||||| || || Sbjct 134388 TCGAAGCATTCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACA 134447 Query 153150 AACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCAC 153209 | | ||| || || | || || ||| ||| | ||||| || | |||||||||| Sbjct 134448 AGGAGAGAGTTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGTCCCAATCCCAC 134507 Query 153210 AGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCT--CGACTGGCGGGAC 153267 | | || || || | |||||||||||||| || | | ||| |||| | || | Sbjct 134508 AAGTCTGAGGGAGTGACATTCCACATGTCGTATTGAAGAATGCCTTGCGACA--CTGGGC 134565 Query 153268 TGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 |||| | | || || | || | | | || | ||||||| || ||| ||| Sbjct 134566 TGCCTTCGTATGTTTCATATGTTCCCTGCTCCTTTG-CCAGTTCACAAGAAGCAGTGAGA 134624 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC--GCTTCTTCGCTCT 153384 || ||| ||| ||||| ||| |||||| |||| | | ||| || || | Sbjct 134625 GCAGCATGGTAGATGGTCTCGAAGATTTGGATATTCA--ATTGCCTGGCCTCGGGAGAGT 134682 Query 153385 CGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444 || | || | |||||| | ||||||||||| ||||| || | |||| |||| || Sbjct 134683 CGAAAGGAAGACGCAGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCGACGG 134742 Query 153445 GTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAA 153504 |||| || |||||| | |||| | | || |||| ||| |||||||| Sbjct 134743 GTCGGTGTCGGAAGTTGCTCTTCTTCGCTTCAGGGACAGGGTAGTAGTTGATATCGATAA 134802 Query 153505 TTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGG 153564 | ||||| |||||||| ||| || | ||| | | | | ||| |||| ||||| Sbjct 134803 TCTTGTTTAGGTTGCGAGTCACAACCTGAGTGACCTCATGAAGACGACCGAAGTCATAT- 134861 Query 153565 TCATTTCGTCGACGCGTACGCATCGATTCACGGCA-----ATAGACGCCAGATTACAGAC 153619 ||| | |||| || | | ||| | ||| | | || |||||||| || || Sbjct 134862 TCA---CCTCGA-GCTTGGTCGACGAATGTCGGGAGAGCCAGGGAGGCCAGATTGCACAC 134917 Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTAT 153679 || ||| |||| | |||| | || ||||| | ||| || ||| || | || Sbjct 134918 AGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGAT 134977 Query 153680 GACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 | ||||| || | ||| ||||| || | |||||| ||||| ||| ||||||| || || Sbjct 134978 GGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGG 135037 Query 153740 TCCGCCGGTCTCGACTTGCGTTTCGACGATA--AACCTATGCAGGTCCTGCGCTCGCACC 153797 || || ||| || | |||| |||| | | || || | ||| || || Sbjct 135038 CGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCAT--AGTTTCTGAGCCTTTACA 135095 Query 153798 CGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCG 153857 ||| ||| |||||||| |||| |||| |||||| || | |||||||| || Sbjct 135096 GTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCA 135155 Query 153858 TAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCG 153917 ||| |||||| ||||| || || ||| ||||| | || | ||| | || Sbjct 135156 TAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGAGAGTCCATTCTTGGTTCTTC 135215 Query 153918 TTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTG 153977 | ||| ||| |||||||| || || ||| | ||||| | | |||||| || | Sbjct 135216 TCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTA 135275 Query 153978 CAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAG 154037 || ||| ||| ||| | |||| || | | | | | ||| |||||||| Sbjct 135276 ACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCAT 135335 Query 154038 GGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGACGTGGCGC 154094 || || | ||||| ||| | |||||| ||||| || ||||||||||||| ||| Sbjct 135336 GGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACGTAGCGA 135395 Query 154095 ACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAA 154154 | |||| ||||||||||| | |||||| || ||| | | |||||||||||| Sbjct 135396 GCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCGTTGGTGCCT 135455 Query 154155 TTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCC-GCCGTA 154213 || | | || ||| || | ||| | || | ||||| || || || || Sbjct 135456 GCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGACCAATACCTCCAGCTGT- 135514 Query 154214 CTTTGATATGGCAGCGC-AGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGC 154272 ||| || || || | |||| || || || || || |||||||| || || Sbjct 135515 CTTGGAGATCATGGCACAAGTC-TTGAGGGTGTCATATATTCCCTCGATGCTGTCTTCTT 135573 Query 154273 GGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGG 154332 | | | | ||||||||| || ||| ||| || | ||||| || || |||| Sbjct 135574 TCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAAGGG 135633 Query 154333 TGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTT 154392 |||| ||||| ||||| || ||| ||| | |||||| |||||||| | || Sbjct 135634 TGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTGTACGTCTCGATGGCCTTTT 135693 Query 154393 CGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGG 154452 | ||||| |||| |||||| || | || || ||||| |||||||| || || ||||| | Sbjct 135694 CAATATCGTCGCTGTGAATACCCACTGCCACACGCATAAGCATGTGTTGGGGCCGTTCAG 135753 Query 154453 CGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAAATACT 154512 | ||| |||| ||||||| | || ||| | || || || ||| |||| ||||| | Sbjct 135754 CAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCCAGCGTCTTGAAACCAAAATATT 135813 Query 154513 TGTA 154516 ||| Sbjct 135814 GGTA 135817 >seq1 Length=1383374 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | ||| | || | || | | | |||||||| || |||||||||||| Sbjct 701587 GCCGCCACGGAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 701528 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || ||| |||||||| || |||| |||| || ||||| |||||||| || Sbjct 701527 CAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 701468 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| || ||| | |||| || | |||||| | ||||| | Sbjct 701467 GATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTG-TCGATCGTGTCGCTGGACTCGA 701409 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGC 138617 |||| | ||| | || || ||||| || || || || || || |||||||| Sbjct 701408 CCTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTCACGAAGATTTGCATGGC 701357 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||| | ||| ||| |||||| | || || || | | Sbjct 702007 CTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAA 701948 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 || || ||||| ||||||||||| || || || ||||| ||| || || | | Sbjct 701947 AATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 701888 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||| | ||||||||| | ||| | ||| || ||||| || || ||||| Sbjct 701887 GTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTAC 701828 Query 138603 AAAAATCTGCAT 138614 || || ||||| Sbjct 701827 GAAGATTTGCAT 701816 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || ||||||||||| | || || |||||| || || || || | | Sbjct 701781 GATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTGCCTGCA 701722 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || ||||| ||||| ||| || || | Sbjct 701721 AAGATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCCTGGATCTTGCTCTTGACG 701662 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| |||| || ||||| | ||| | ||| || ||||| || || ||| Sbjct 701661 TTGTCGATCGTGTCGCTCGATTCAACCTCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTT 701602 Query 138601 ACAAAAATCTGCATG 138615 || || || |||||| Sbjct 701601 ACGAAGATTTGCATG 701587 >seq2 Length=1089760 Score = 107 bits (118), Expect = 2e-18 Identities = 219/322 (68%), Gaps = 5/322 (2%) Strand=Plus/Minus Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463 ||||| ||||| ||||| ||| | || || || || |||||| ||||||| | Sbjct 279992 GTGGCTTTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCATCCATCTTCTGG 279933 Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523 | || | ||||| | ||||||||||| || ||| ||||||| | || || || ||| Sbjct 279932 CTGAAGAGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGAC 279873 Query 52524 GAAGGACTGCACACGGACTTTGCGTGCC-TCTACTACAAGACGCGCGTGACCGAAAAATT 52582 || || ||||||||||||||||||||| | | | ||| | || | | | || Sbjct 279872 GAGGGCATGCACACGGACTTTGCGTGCCTTTTGATGCAACATCTGC---AGC-ACAAGCC 279817 Query 52583 GGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTT 52642 ||| | | ||| | ||| | | || || || ||||||||||| || | Sbjct 279816 GGACCCACAACTCATCGAAAACATTATAACCGAAGCCGTCAGGATCGAAAAGGAATTCCT 279757 Query 52643 TACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACAT 52702 || | || || || |||| ||||| ||||||||| || || |||||| ||||||| Sbjct 279756 CACCGATGCCCTCCCCGTCGCACTGCTCGGCATGAACTCGAAGCTCATGTGTCAGTACAT 279697 Query 52703 CGAGTTTGTGGCGGATCGTCTG 52724 |||||||| || || |||||| Sbjct 279696 TGAGTTTGTTGCTGACCGTCTG 279675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259521678080