Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq91 132 4e-26 seq1 93.3 4e-14 >seq91 Length=177601 Score = 132 bits (146), Expect = 4e-26 Identities = 542/848 (64%), Gaps = 15/848 (2%) Strand=Plus/Minus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975 ||||| ||||| ||||| || || | || | ||| | ||| || ||||| || | | Sbjct 135742 CAACACATGCTTATGCGTGTGGCAGTGGGTATTCACAGCGACGATATTGAAAAGGCCATC 135683 Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035 || || ||| || | ||||| || || | || || ||||| ||||| | ||| | Sbjct 135682 GAGACGTACAATCTCATGTCCCAGAAGTGCTTTACCCACGCTTCGCCCACCCTTTTCAAC 135623 Query 123036 GCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGC 123095 ||||| || ||||| |||| || ||||| ||| | | || ||||||||| Sbjct 135622 GCCGGAACCCCTCAACCTCAACTGTCCTCCTGTTTCTTGATTGACATGAAAGAAGACAGC 135563 Query 123096 ATCACCGGTATCTATGAAACTTTGCGCGA-TTGCGCGTTGATTTCCAAATTTGGCGGCGG 123154 ||| || || ||||| || | | || ||| || |||| ||||| | || || Sbjct 135562 ATCGAGGGAATATATGACACCCT-CAAGACTTGTGCCATGATCTCCAAGACAGCTGGAGG 135504 Query 123155 CATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGG 123214 || || | || | || | | | | | ||| | ||| | ||||| |||| Sbjct 135503 TATTGGTCTCAATGCCCATTGCATTCGTGCCACAGGATCCTACATTGCAGGCACCAACGG 135444 Query 123215 AATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGA 123274 | | || |||||| ||||||| || || | |||||| | | || ||||||| Sbjct 135443 CACCTCCAACGGGCTTATCCCCATGCTTCGCGTCTTCAATAATACTGCTCGCTACGTCGA 135384 Query 123275 CCAGGGCGGCAAA---CGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGA 123331 ||||| ||||| ||| ||| || | || ||||| || || || ||||||| || Sbjct 135383 TCAGGGTGGCAATAAGCGCCCAGGTGCTTTTGCCATCTACCTCGAGCCATGGCACGCAGA 135324 Query 123332 TGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGA 123391 |||| ||| ||||| || | | | ||| || |||||| | ||| ||||| Sbjct 135323 CGTGTTCGACTTTTTGAACCTGAGAAAGAACCACGGCAAGGAAGAGGTTAGAGCACGCGA 135264 Query 123392 TTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGT--AAAAGACGACGGC 123449 ||||| ||||| | ||| || || ||||| ||| ||| || | |||| || Sbjct 135263 CTTGTTCTACGCCATGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGAAGA--ACCAA 135206 Query 123450 GTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAG 123509 | ||| | ||| | ||||| || | || ||| | |||||| || || | || Sbjct 135205 GAATGGACTCTCTTCTGTCCTCATGAGGCACCTGGCCTTGCCGACGTCTATGGTGACGAG 135146 Query 123510 TTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAG---GTTCCG 123566 || ||| | |||| | ||| ||| || ||| | | | | ||| || | Sbjct 135145 TTCAACGCTCTATACGAGAGATATGAGAAGGAGGGC---CGTGGTCGCCAGACTGTAAAG 135089 Query 123567 GCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATG 123626 || | | | | | ||| |||| |||| |||||| || ||||| || ||| Sbjct 135088 GCTCAGAAACTATGGTATGCTATCCTCGAGGCACAGACCGAAACTGGGACGCCCTATATG 135029 Query 123627 CTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGT 123686 |||||||| ||||||||||| || || | ||| |||| |||||||| || || | | Sbjct 135028 CTCTACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAACTTGGGGACCATCCGAAGC 134969 Query 123687 AGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAAT 123746 ||||||||| | || ||| ||||||||| | | ||||| | || || ||||| ||| Sbjct 134968 TCCAATCTTTGCACTGAGATTGTCGAATACACGGCTCCCGATGAGGTCGCTGTGTGCAAT 134909 Query 123747 TTGGCTTC 123754 |||| || Sbjct 134908 CTGGCCTC 134901 Score = 84.2 bits (92), Expect = 2e-11 Identities = 174/259 (67%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 124065 TACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAAT 124124 || |||| |||| |||||||| | | | ||| ||| | || ||||||||||||||| Sbjct 134584 TATGAAACATACGAAGGCAGCCCAGTGTCGCAAGGCATTCTTCAATACGACATGTGGAAT 134525 Query 124125 GCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGT 124184 | || || || | |||||||| ||| || || ||| || | | || ||| Sbjct 134524 GTCACTCCCTCAGACTTGTGGGATTGGGACGCCTTGAAAGCCGAGATTGCCAAACATGGT 134465 Query 124185 TTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGA 124244 | || ||||| || | || || |||||| || || | ||| ||||||| | || Sbjct 134464 ATTCGCAACTCTCTCCTTGTTGCTCCCATGCCCACTGCCTCGACTTCTCAAATCCTCGGC 134405 Query 124245 AACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGC 124304 |||||||||| |||||| |||| ||| ||| | ||| || || || | ||||| Sbjct 134404 AACAACGAATGCTTCGAACCGTACACATCTAATATCTACTCTCGCCGTGTCCTTGCCGGT 134345 Query 124305 GATTTTCAAGTGATAAATC 124323 || || || || | |||| Sbjct 134344 GAGTTCCAGGTTGTCAATC 134326 >seq1 Length=1383374 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || || |||| ||| | |||| ||| ||||| ||||| || || |||||| Sbjct 702042 CCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 701983 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || || ||||| || || || ||| | |||| || ||||||||||| ||| Sbjct 701982 AGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGA 701923 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || |||| || | || | ||||| || ||| || Sbjct 701922 ATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGTTGTCGATCGTGTCTGAGCTCTCCAC 701864 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||| ||| ||||| || || || ||||| || |||||||| Sbjct 701863 CTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000578381440