Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq91 221 1e-52 seq2 84.2 3e-11 >seq91 Length=177601 Score = 221 bits (244), Expect = 1e-52 Identities = 1115/1745 (64%), Gaps = 45/1745 (3%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATA-TGCATTGAGGA 115616 || ||||||||||| || |||||||| ||| |||||| | | || | ||||| | Sbjct 134022 CGCAGGTAGTACATGCCGGTCTTGAGACCCATTTTCCAGCC-TGCAAAGTGCATGCTCGT 134080 Query 115617 CAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 115676 | |||| | ||||| || || | || ||| | | ||||| || || ||||| Sbjct 134081 GATCTTGCCCATGGTTGGTTCTTTCAAGTGGATGTTGAGAGACTGGGACTGGTCAATGAA 134140 Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 115736 | || || ||||| ||||| | | || | | |||||||||| || || | Sbjct 134141 GGCACCACGGTCCGCTGCCATTTGCAGGACGGTCCGCTGGCTGATTTCCCATACGGTCTT 134200 Query 115737 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTT 115796 ||| || || || || | |||| | ||| |||||||| ||||| || || Sbjct 134201 GTACAGAGCTTTGATGTCCGCAGGGACGTTGGGGATGTTTTGGATCGAGCCGCC---CTC 134257 Query 115797 GACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCAC 115853 | | |||| ||| |||||||| | ||||| || || | | |||||||| || Sbjct 134258 GGCGATGATCCGATTCTTCATATTGTCGGACCATAGGCCCAAGTCGACGAGATCCTTCAG 134317 Query 115854 GAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGG 115912 || ||||||||| |||||||| || ||| || | ||| ||||| || | Sbjct 134318 CAGCCAGGGATTGACAACCTGGAACTCACCGGCAAGGACACGGCG-AGAGTAGATATTAG 134376 Query 115913 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 115972 ||||| || || ||||| || ||||| || | |||||| | || ||||| ||||||| Sbjct 134377 ATGTGTACGGTTCGAAGCATTCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCA 134436 Query 115973 TGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGT 116032 |||| || | || || |||||| | ||| ||| | || | ||||| Sbjct 134437 TGGGAGCAACAAGGAGAGAGTTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGT 134496 Query 116033 CCCAGTCGTA---GT-TGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCT 116088 |||| || | || |||| || | | |||||| || | || || || ||| Sbjct 134497 CCCAATCCCACAAGTCTGAGGGA-GTGACA---TTCCACATGTCGTATTGAAGAATGCCT 134552 Query 116089 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAG 116148 || ||| |||| || || |||| ||||||| |||| ||| |||| ||| | Sbjct 134553 TGCGACACTGGGCTGCCTTCGTATGTTTCATATGTTCCCTGCTCCTTTGCCAGTTCACAA 134612 Query 116149 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGC 116207 || ||| || || || || || ||||| || || | ||||| |||||| ||| Sbjct 134613 GAAGCAGTGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGATATTCAATTGCCT-GGC 134671 Query 116208 CTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACC 116267 |||| || || || | ||||| | || || | || ||||||||||| || || Sbjct 134672 CTCGGGAGAGTCGAAAGGAAGACGCAGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCC 134731 Query 116268 GAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATT 116327 ||| || | || || |||| | || ||| || || || || | || Sbjct 134732 GAGACCGACGGGTCGGTGTCGGAAGTTGCTCTTCTTCGCTTCAGGGACAGGGTAGTAGTT 134791 Query 116328 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 ||||||||| | | ||||| || || ||||||| |||| |||||||| | Sbjct 134792 GATATCGATAATCTTGTTTAGGTTGCGAGTCACAACCTGAGTGACCTCATGAAGACGACC 134851 Query 116388 GTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 116444 | | ||| | || |||| ||| | ||| | | || || || | || ||||| Sbjct 134852 GAAGTCATATTCACCTCGAG---CTTGGTCGACGAATGTCGGGAGAGCCAGGGAGGCCAG 134908 Query 116445 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGA 116504 ||| ||||||| | |||||| | | ||||| || | ||| || || || | ||| || Sbjct 134909 ATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAAAGATTGGA 134968 Query 116505 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAG 116564 || ||||| ||||||||||| || || |||| | || || || ||||||||||| Sbjct 134969 GCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAGAG 135028 Query 116565 CATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGG 116623 |||||| |||||||| || || || || | || ||| ||||| | ||||| || | | Sbjct 135029 CATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATAGTTTCTGAGC 135088 Query 116624 CTGGCACAG--TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAA 116681 || |||| ||||| | || ||||||| ||| || | ||| || || | || Sbjct 135089 CT-TTACAGTCTGGCG--ACCACGGCCCTCCTTCTCATATCTCTCGTATAGAGCGTTGAA 135145 Query 116682 CTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATT 116740 ||| ||| ||| || | || | || || ||||||| || ||||||||||||| ||||| Sbjct 135146 CTCGTCA-CCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGAGAGTCCATT 135204 Query 116741 GACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGAT 116800 || ||| || || | |||||| | ||| || |||| | || |||| | | Sbjct 135205 CTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGT 135264 Query 116801 CCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 116860 | || | | | ||||| | || || || | || | ||||||||| | | | Sbjct 135265 CGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGT 135324 Query 116861 CCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGT 116917 | |||||||| || || ||||| | || | | || ||| | ||| |||| | Sbjct 135325 CTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGAT 135384 Query 116918 TTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGC 116977 || || | || || || || ||||||||||| || || | || | || || Sbjct 135385 CGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGC 135444 Query 116978 CATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGA--CATCGTGGATGTGCATACCAA 117034 | || || || ||| || | || |||| | | || | | || || | ||||| Sbjct 135445 CGTTGGTGCCTGCAATGTAGGATCCTG-TGGCACGAATGCAATGGGCAT-TG-AGACCAA 135501 Query 117035 TACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGA 117094 |||| || || ||| ||||| || || | |||| || | || || || |||| Sbjct 135502 TACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGA 135561 Query 117095 TCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAG 117154 | ||| | || | | || | ||| ||| |||| ||| || || || || | Sbjct 135562 TGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGG 135621 Query 117155 CGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACATCTTATCGTAGGTC 117213 ||||||| ||||| || | |||||| | || || | |||||||| || ||| ||| Sbjct 135622 CGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTC-TGGGACATGAGATTGTACGTC 135680 Query 117214 TCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTAT 117273 || | | | ||| || || | ||||||||| | || || ||||||| ||||| | Sbjct 135681 TCGATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACACGCATAAGCATGTGT 135740 Query 117274 TGGGG 117278 ||||| Sbjct 135741 TGGGG 135745 >seq2 Length=1089760 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | ||||||||||| |||||||| || || |||||| || || Sbjct 279850 GCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 279909 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || || |||||| |||||| || | ||| || |||||||||||||| Sbjct 279910 GGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAAGATG 279969 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAG 127678 || || || ||||| || | ||| || | ||||||| Sbjct 279970 CCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAG 280008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503641658240