Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2 116 6e-21 >seq2 Length=1089760 Score = 116 bits (128), Expect = 6e-21 Identities = 230/332 (69%), Gaps = 15/332 (5%) Strand=Plus/Plus Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC 159805 |||| | ||| || ||||| || ||||| |||||| ||| |||| || || ||| Sbjct 279673 AGCAGACGGTCAGCAACAAACTCAATGTACTGACACATGAGCTTCGAGTTCATGCCGAGC 279732 Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865 || |||||||| || || | || || ||||| || ||| ||| |||||||| | | Sbjct 279733 AGTGCGACGGGGAGGGCATCGGTGAGGAATTCCTTTTCGATCCTGACGGCTTCGGTTATA 279792 Query 159866 ATCTG--CGA-GACACGTTCGTACCCCGGCTTGCCCA--AAATGTGGTCCTTAAACAGGA 159920 || | ||| || || || |||||||| | | |||| | | | ||| | Sbjct 279793 ATGTTTTCGATGAGTTGTGGGT---CCGGCTTGTGCTGCAGATGTTG-CATCAAA----A 279844 Query 159921 GGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGA 159980 ||||||||||||| ||||| |||||||| |||||||||| ||||||||| | | ||| Sbjct 279845 GGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGA 279904 Query 159981 GGCCCGGCATGA-TCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAA 160039 |||| ||||| | ||| || || ||||| || |||| ||||| | || || Sbjct 279905 GGCCGGGCATCAGTCCTTTGC-TCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAG 279963 Query 160040 AAGATCCCCTCCACGGCCGCAAACGCCACGAG 160071 ||||| || || ||||| || || ||||| || Sbjct 279964 AAGATGCCTTCGACGGCTGCGAAAGCCACTAG 279995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150588099840