Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 8e-30
seq2 141 9e-29
seq112 100 3e-16
seq17 96.9 3e-15
seq51 91.5 1e-13
>seq1
Length=1383374
Score = 145 bits (160), Expect = 8e-30
Identities = 174/231 (75%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| |||||||| || || || ||||| || || || | || || ||| | |
Sbjct 701816 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAGAGCTCA 701875
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || || |||| ||||| ||||| ||||| | |||||
Sbjct 701876 GACACGATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 701934
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||||| |||| ||||||||| ||| |||| |||| ||| || |||| |||||||||
Sbjct 701935 GCAGCGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGCGACTACAA 701994
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| ||||| ||| ||| |||| ||||||||| | || | |||||||
Sbjct 701995 CATCCAGAAGGAGAGC-ACGTTGCACTTGGTGCTGAGACTGCGTGGCGGCC 702044
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| |||||||| | || |||||| ||| |
Sbjct 701360 ATGCAAATCTTCGTGAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 701419
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | ||| || |||| ||||| ||||| || ||| | |||||
Sbjct 701420 GACACGATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 701479
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| || || || |||| |||||||| ||||||||||
Sbjct 701480 CAGCGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTGTCCGACTACAAC 701539
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| |||| ||||| |||| || ||| | | ||||||
Sbjct 701540 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTCCGTCTCCGTGGCGGC 701587
Score = 125 bits (138), Expect = 7e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| |||||||| || || || ||||| || ||||| | || || || | | |
Sbjct 701588 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATCACGCTGGAGGTTGAATCGAGC 701647
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| || | | | | |||| || |||| ||||| || || || || |||||||
Sbjct 701648 GACA-CGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGGATCCCGCCCGACCA 701706
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | || ||||| |||||||| |||| ||||| ||| ||||||||
Sbjct 701707 GCAGCGCCTGATCTTTGCAGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAA 701766
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| |||||| ||||||| ||| | ||||| ||
Sbjct 701767 CATCCAGAAGGAATCGACGCTCCATCTCGTGCTCCG 701802
>seq2
Length=1089760
Score = 141 bits (156), Expect = 9e-29
Identities = 359/536 (67%), Gaps = 19/536 (4%)
Strand=Plus/Plus
Query 132699 CTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT 132758
|||| |||| |||| | | |||||| | ||| || || ||||| ||||| || ||||
Sbjct 279654 CTTGTTGCC---CAGGGCAAGGAGCAGACGGTCAGCAACAAACTCAATGTACTGACACAT 279710
Query 132759 G-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCT 132817
| | |||| | || | || ||||| || || || || |||||||| || | |
Sbjct 279711 GAGCTTCG-AGTTCATGCCGAGCAGTGCGACGGGGAGGGCATCGGTGAGGAATTCCTTTT 279769
Query 132818 CGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCA 132877
|||| ||| || ||||| | || | | | | | | |||| ||| ||
Sbjct 279770 CGATCCTGACGGCTTCGGTTATAATGTTTTCGATGAGTTGTGGGTCCGGCTTGTGCTGCA 279829
Query 132878 AATGCTTGAACATCAA---GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGA 132934
||| ||| |||||| ||| |||||||| |||| ||||||||| | || ||||
Sbjct 279830 GATG-TTG--CATCAAAAGGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGA 279886
Query 132935 GTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGG 132994
| |||||| ||| || | ||||||||| || || | || ||||| || |||| |
Sbjct 279887 GCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATG 279946
Query 132995 CGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGA 133054
| || || || ||||||| ||| |||||||| ||||||||||| || || | | | |
Sbjct 279947 CAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAA 280006
Query 133055 ACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTT--TGACGCA 133112
| | | |||||| | ||||| ||||| ||||| || || |||||| | |||
Sbjct 280007 AGCTCGACTCTTTGTCTGATATCCATCGCAGAGCCCAGTCTGC--TTTCTTGCGAATGCA 280064
Query 133113 CGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGT 133172
|| || || |||||||||| |||| | ||||||| | | || |||||
Sbjct 280065 AGGGATTGTGTCGATGGCGTCGAACAGATATGTCTTCTCTTTGGGGTCCTTTACATAGGT 280124
Query 133173 GTCGATGAG--GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||| ||||| || | |||||||||||||| | |||||||| || ||||||
Sbjct 280125 GTCAATGAGAAGGCTG--TACATTTCCGAGTGGATATTCTCCATCATGACTTGAAA 280178
>seq112
Length=144762
Score = 100 bits (110), Expect = 3e-16
Identities = 151/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||| | || || || || | ||| || ||||| | || || ||| | | |
Sbjct 46099 ATGCAGATTTTCATGAAGACACTTACTGTCAAGACGATCACGCTGGAGGTTGAGTCGAGC 46040
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | ||| | | |||| || || ||||| || || || | |||||||
Sbjct 46039 GACACAAT-CAACAACATCAAGAGCAAGATTTAGGACAAGGAAGGGATCACATCCGACCA 45981
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | |||||||| |||||||| |||| ||||| ||| ||||||||
Sbjct 45980 GCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAA 45921
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGC 38454
|||||| |||||| ||||||| ||| | ||||
Sbjct 45920 CATCCAGAAGGAATCGACGCTCCATCTCGTGC 45889
>seq17
Length=408214
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| | || |||||| | |||||| |
Sbjct 189906 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACGATC 189965
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || || |||| ||||| || || || || ||||||| ||||| |
Sbjct 189966 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGATT 190024
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | ||| ||||| || || || || | || || || | ||||||||||||||| ||
Sbjct 190025 GATCTTCGCCGGCAAGCAACTTGAAGATGGCCGAACTCTGAGCGACTACAACATCCAGAA 190084
Query 38432 GG 38433
||
Sbjct 190085 GG 190086
>seq51
Length=241757
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| || || |||||| | ||||| || || || || | ||| ||||| || || ||
Sbjct 20372 GACAAGGAAGGCATTCCCCCGGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 20431
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| ||||| ||| ||||||||||||||| |||||| |||| || || |||| ||
Sbjct 20432 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCGACCCTCCACCTGGTCTTG 20491
Query 38457 CGT 38459
|||
Sbjct 20492 CGT 20494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500169898997760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |