Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq145 109 2e-18 >seq145 Length=87328 Score = 109 bits (120), Expect = 2e-18 Identities = 240/355 (68%), Gaps = 6/355 (2%) Strand=Plus/Minus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||||||| || | |||||||| || ||||| ||| || || ||| Sbjct 22695 CTCCCGAAGAAATCTCCGCCATGGTTCTAGGCAAGATGAAGGAAGTTGCGGAGGCATACC 22636 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || |||||| | ||||| | || || || || || ||||| || || || | Sbjct 22635 TGGGCAAGAAAGTTACCCACGCAGTTGTCACGGTCCCGGCATACTTCAACGACGCTCAGC 22576 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||| || |||||||| || ||| |||||||| | |||||| || || | || | Sbjct 22575 GACAAGCTACCAAAGATGCTGGTACTATCGCTGGTTTGACTGTTCTGCGTGTTGTGAACG 22516 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 | || || || || ||| | || ||||| || ||| || ||| || |||| | Sbjct 22515 AGCCAACTGCCGCAGCTATCGCCTATGGCCT-GGACAAG---AAGGG-CA-AAGAGAGCC 22462 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 | || | || | ||| ||||||| || || ||| ||| | ||||||||||||| Sbjct 22461 AGATCATTGTCTACGATCTTGGTGGTGGTACATTCGATGTTTCCCTTCTTTCAATTGAAG 22402 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 |||| || || || || ||| ||| ||||| |||||||| || || ||||| Sbjct 22401 ATGGCGTTTTCGAGGTCCTGGCCACCGCCGGTGACACTCATCTTGGTGGCGAAGA 22347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975706654354112