Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq12 480 1e-130 seq44 199 5e-46 seq145 158 2e-33 seq46 84.2 3e-11 >seq12 Length=458364 Score = 480 bits (532), Expect = 1e-130 Identities = 1046/1556 (67%), Gaps = 21/1556 (1%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || || ||||| || || | | ||||| || || || || |||||| | || || Sbjct 96395 TCGATCTCTTCCTTGGACAGACGACCCTTGTCGTTGGTGATGACAATCTTGTTCGACTTG 96336 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | | |||| || | ||| || |||| || || || ||||||| |||||| | Sbjct 96335 CCAGTGCCCTTCTCGACGGCAGAGACGTTCATGATTCCGTTGGCATCAAGATCGAATGTG 96276 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | || || || ||| | || || | |||||||| | | || || | ||| Sbjct 96275 ACCTCGATCTGGGGAACACCACGGGGAGCAGGGGGAATACCGGAAAGTTCGAACTTGCCA 96216 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | |||| ||| | | ||| ||||| || ||||||| ||| ||| || Sbjct 96215 AGCAGGTTGTTGTCCTTGGTGCGAGCACGCTCACCCTCGTAGACTTGAATAAGCACACCA 96156 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || || || || || |||||| | | ||||| | || || || || || Sbjct 96155 GGCTGGTTGTCAGAGAAGGTGGAGAAGGTCTCGGACTTCTTGGTGGGGATGGTGGTGTTG 96096 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 | | || | || ||||| | |||||| ||| |||| || || ||||| || | Sbjct 96095 CGCTTGATGAGAGGAGTCATGACACCACCAGCAGTCTCGATACCGAGGGACAGTGGCGCG 96036 Query 6971 ACGTCCAAGAGTAACAGGTC-TTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGC 7026 || |||||||| || | || ||| | || | | | ||||| | | ||| || Sbjct 96035 ACATCCAAGAGCAAGATCTCGTTGGTC-GACTTGGACGAGGTGTCACCAGACAGGATAGC 95977 Query 7027 GGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTC 7086 ||||||||| | || ||||| ||||| |||||||||||||| || | ||| || | || Sbjct 95976 GGCTTGGACGGCAGCACCGTAGGCGACGGCCTCATCGGGGTTGATTGATTTGTTGGGCTC 95917 Query 7087 TTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACC 7146 || ||||| || | || || | | | || ||| | ||||| || || || ||||| Sbjct 95916 CTTGCCGTTGAAGAAGTCGGAAACAAGCTTCTGGATTCTGGGGATACGGGTGGAACCACC 95857 Query 7147 GACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTC 7206 |||||| |||||||| | || || || |||||||| | || || || || Sbjct 95856 GACCAAGACGATTTCGTGAACGGAAGACTTGTCGATCTTGGCATCACGCAGGACACGCTC 95797 Query 7207 GACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGT 7266 ||||| |||||| ||||| | ||| || || || || ||||| || ||||| Sbjct 95796 CACAGGCTCCATAGTAGATCGGAAGAGATCCTGGCAGAGCTCTTCGAAACGGGCTCGGGT 95737 Query 7267 AATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGC 7326 || || || ||||| || | ||| ||||| | ||||| ||||| || | || ||||| Sbjct 95736 GATCGAGGTGTAGAAGTCGATGCCTTCGTAGAGGGAATCGATTTCGATAGAGGTCTGTGC 95677 Query 7327 CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACG 7386 | ||| || | || ||||| || |||||||| || ||||| | |||||| || || || Sbjct 95676 AGACGAGGACAGGGTGCGCTTGGCACGCTCACAGGCAGTTCGGAGACGACGCAGAGCCCG 95617 Query 7387 CGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA- 7444 | || | | | |||||| ||| || ||||| || || | | ||||| || || Sbjct 95616 AGCATTGCTGCTCAAGTCTTTCCGATGCTTGCGTTTGAATTCGTTAACGAAGTGGTTGAC 95557 Query 7445 AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACT 7504 | || | | ||||| ||||||||||||||||| || || || || || | |||||| Sbjct 95556 AAGACGGTTG--TCGAAGTCTTCACCACCCAAGTGAGTGTCGCCGGCAGTGGACTTGACT 95499 Query 7505 TCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCA 7564 || |||||||| | |||||| | || | |||||||| || ||||||||||| || || Sbjct 95498 TCGAAGATACCCTCCTCAATGGTCAAGAGAGAAACATCGAAAGTACCACCACCAAGATCG 95439 Query 7565 AAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCC 7624 || ||||| || || || | || ||||| ||||||||||| || || || || Sbjct 95438 AAGATGAGGACATTGCGCTCACCCTCAGCCTTCTTGTCGAGACCGTAGGCAATGGCGGCA 95379 Query 7625 GCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTC 7684 || || ||||| || || ||||| || ||| ||||| || || | ||||| || Sbjct 95378 GCAGTGGGTTCGTTGATGATACGGAGGACGTTGAGGCCTGCGATCAGACCAGCATCCTTG 95319 Query 7685 GTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACT 7744 || ||||| || || || ||||| |||||||| ||||| || | ||| |||| ||||| Sbjct 95318 GTAGCTTGGCGCTGAGAGTCGTTGAAGTAGGCAGGGACAGTAATGACTGCGTTGTTGACT 95259 Query 7745 TTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATC 7804 | |||||| || || ||||| | ||| |||| ||||| | ||||| || || ||| Sbjct 95258 GTGCCACCGAGGTATGACTCCGCAGTCTCTCTCATCTTGGTCAAGACCATGGAGGAGATC 95199 Query 7805 TCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCC 7864 ||||| | | ||||| ||| |||||| || || || || | || | || || Sbjct 95198 TCTTCGGGTGTGAACTGCTTCTCTTCACCTTTGAACTCCACCTGGATGACTGGCTT---- 95143 Query 7865 GCAGCACC---GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG 7921 || |||| | || ||||| | | | | ||||| ||| ||||||| | Sbjct 95142 GC--CACCCTTGTCAATGACCTTGAAGGGGAAGTGCTTCATGTCGGCTTGGACTTCGGCA 95085 Query 7922 TCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATG 7981 || || || | || || || ||||| || ||||| || ||||| | |||||||| Sbjct 95084 TCGCTGAATTTCCGACCAATCAGTCGCTTGGCGTCAAAGACGGTGTTGTGAGGGTTCATC 95025 Query 7982 GCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACG 8041 || ||||||||| || || || || || ||||| || | || || || || ||| Sbjct 95024 GCGACTTGGTTCTTTGCGGCATCACCAATCAGACGCTC---TGTGTCGGTGAAAGCAACG 94968 Query 8042 TACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGC 8101 |||| || || ||||| || || |||||||| |||||||| || | |||||| | | | Sbjct 94967 AACGAGGGAGTGGTTCGGTTGCCCTGGTCGTTGGCAATAATCTCGATGCGGTCATCTCGG 94908 Query 8102 CAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157 ||||||| || ||||| || ||||| |||| ||| ||||| || ||| | | ||| Sbjct 94907 AAGACGCCTACACACGAGTAGGTTGTACCTAGATCGATACCAATGGCTGGTGCCAT 94852 >seq44 Length=259855 Score = 199 bits (220), Expect = 5e-46 Identities = 359/518 (69%), Gaps = 9/518 (2%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || |||||||| || |||||||| |||| | || ||| || |||||||| | ||||| Sbjct 27319 AGATCCTCAAATCGGGCACGGGTGATGGTAGCATTGAAGTCCTCGCCGTCGAACAACGAG 27378 Query 7304 TCAATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 |||||||||| || | || | |||| || || |||| |||||| || || || | Sbjct 27379 TCAATTTCAACCGTGGCCTGGGTTCCGTTC--GACAAGGTTCTCTTTGCACGTTCGCAGG 27436 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | || || | || ||||||||||| | || ||| || | || ||||| || | Sbjct 27437 CGGTGCGGAGTCGTCGAAGGGCACGGGCGTCACCAGACAAGTCCTTCTTGGTCTTCCTCG 27496 Query 7422 TAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 | ||||| | ||| || |||| |||| | | || || |||| ||||||||| || Sbjct 27497 TGAACTCCTTCTTGAAATGCTCGA-GGAGGTTGGTGTCAAAGTCTTGACCACCCAAATGG 27555 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 ||||| || || || || ||||| |||| ||| || | ||||| |||| ||||||| Sbjct 27556 GTATCTCCAGCAGTAGCCTTGACCGTGAAGACACCACCCTGGATGTTCAACAGCGAAACA 27615 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT--TTGTTCT 7598 || || ||||||||||| ||||| | ||||| ||||| || | |||| || | Sbjct 27616 TCGAATGTACCACCACCAAGGTCGTAGATGAGGACGTTTCGCTCCTTGTCTGATTTGCCG 27675 Query 7599 TAT-CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 || | |||||||| ||||| || || || || ||||| || || ||||| || ||| Sbjct 27676 GATCCAAGACCGTAGGCGATGGCGGCGGCGGTGGGTTCGTTGATGATACGGAGGACGTTG 27735 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 ||||| | ||| | | ||||| || || |||||||| || || || || || || Sbjct 27736 AGGCCGGAAATGGCACCGGCATCCTTGGTAGCTTGTCGCTGGTTGTCATTGAAATAAGCA 27795 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || || | ||| || | | || ||||| || || Sbjct 27796 GGCACGGTGATGACGGCCTTGGAAACCTTCTTGCCCAG 27833 >seq145 Length=87328 Score = 158 bits (174), Expect = 2e-33 Identities = 254/358 (71%), Gaps = 13/358 (4%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| ||||| ||||| | || || || || ||||| || ||| || || | || Sbjct 22341 TCGAAGTCTTCGCCACCAAGATGAGTGTCACCGGCGGTGGCCAGGACCTCGAAAACGCCA 22400 Query 7517 CCTTCAATGTTTAACAACG-AAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 ||||||| | || || | ||||||| || ||||||||||| || || | || | Sbjct 22401 TCTTCAAT-TGAAAGAAGGGAAACATCGAATGTACCACCACCAAGATCGTA---GACAAT 22456 Query 7576 GTTCGTATCGTCGTCTTTG---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | || | | |||||| ||||| || || || || |||||||| || || ||||| Sbjct 22457 GATC---TGGCTCTCTTTGCCCTTCTTGTCCAGGCCATAGGCGATAGCTGCGGCAGTTGG 22513 Query 7633 TTCATTAATAATACGAAGA-CAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 || || | || ||| ||| |||| || ||||| ||||| | |||||||| || |||| Sbjct 22514 CTCGTTCACAACACGCAGAACAGT-CAAACCAGCGATAGTACCAGCATCTTTGGTAGCTT 22572 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 |||| || | ||||| ||||| ||||||||||| || || |||| || |||||||| | Sbjct 22573 GTCGCTGAGCGTCGTTGAAGTATGCCGGGACCGTGACAACTGCGTGGGTAACTTTCTTGC 22632 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 | || || | ||||| | || ||||| ||| |||||||| | || || ||||| Sbjct 22633 CCAGGTATGCCTCCGCAACTTCCTTCATCTTGCCTAGAACCATGGCGGAGATTTCTTC 22690 Score = 96.9 bits (106), Expect = 4e-15 Identities = 236/358 (66%), Gaps = 0/358 (0%) Strand=Plus/Plus Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694 ||||| || ||||| || || ||| ||| || || |||| | | || || |||| Sbjct 21525 CCCTTGTCGTTCGTGATGGTGATCGATTCAGACTTGCCCGTGCCTTTGTCGCCAGCCGAG 21584 Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 || || | |||||| ||||| || | ||||| || | ||| || || ||| | Sbjct 21585 ACCTTGAGAATACCGTTTGCGTCGAGTTCGAAAGACACTTCAATCTGAGGAACACCACGA 21644 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814 || |||| |||||||| || | || ||| | || || | |||| ||| | | | | Sbjct 21645 GGGGCGGGAGGAATACCGGTCAGTTCGAATTTGCCCAGAAGGTTGTTGTCCTTGGTCATT 21704 Query 6815 TTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAG 6874 ||||| |||||| | || | || || | ||||| ||||| ||||| ||| Sbjct 21705 GCTCGTTCGCCTTCAAAAACCTGGATCAGTACTACGGGTTGGTTATCCGCAGCCGTAGAG 21764 Query 6875 AAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATA 6934 |||||||| |||||| | || | | || |||| ||||| | |||||| | Sbjct 21765 AAGATTTGGGATTTCTTGGTCGGTACCAGTGTGTTTCGGGGAATGAGTTTGGTCATGACT 21824 Query 6935 CCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTT 6992 ||||| ||||||| | || |||| |||||| | || |||| ||| | ||||||| Sbjct 21825 CCACCGGTAGTTTCAATGCCGAGAGTCAGAGGATTGACATCCATGAGAATAAGGTCTT 21882 >seq46 Length=254406 Score = 84.2 bits (92), Expect = 3e-11 Identities = 192/282 (68%), Gaps = 9/282 (3%) Strand=Plus/Minus Query 11367 GAAACCATCCATTTCTGTTAATAATTGGTTAATTGTTTGTTCACGCTCATCGTTTGCCGC 11426 ||| ||||||||||| || || | |||||| | ||| ||| |||||||| || ||| | Sbjct 166827 GAAGCCATCCATTTCGGTCAAAATTTGGTTGAGTGTCGATTCCCGCTCATCATT-GCCAC 166769 Query 11427 AAACCCATTCATACTTC----TTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAA 11482 | | | | | ||| || ||| ||||| ||||||||||| || || ||||| | Sbjct 166768 CACCAAAGTTTTGTTTCGCCCTTGACTTGCCAATGGCATCAATTTCGTCAATGAAGATGA 166709 Query 11483 TACACGGTTGATTTTCACGTGCCAAT-TCAAATATATCACGGACTCTTTTTGCGCCTACG 11541 | ||||| ||| | | || || | |||| | || || |||| || ||| || Sbjct 166708 TGCACGGCGCATTCTTTC-TGGCATTGGCAAACAGGTCCCGCACTCGAGATGGGCCGACA 166650 Query 11542 CCTACAAACATTTCAACGAACGATGACCCCGAACACTGA-ATAAAAGGAACGGAAGATTC 11600 || ||||||||||| ||||| || || | | ||||| | || |||||| ||||| Sbjct 166649 CCGACAAACATTTCGACGAATTCGGAACCAG-AGACTGAGAAGAAGGGAACGCCGGATTC 166591 Query 11601 ACCCGCTATAGCACGTGCTAAAAGTGTTTTACCTGTACCTGG 11642 ||| || | || || || || || ||||| ||||| || Sbjct 166590 ACCAGCGGTCGCCTTGGCCAACAGCGTCTTACCAGTACCCGG 166549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129116229760