Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 123 3e-23 >seq2 Length=1089760 Score = 123 bits (136), Expect = 3e-23 Identities = 186/259 (72%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 102078 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGAT 102137 ||||||| | || || || |||||| | ||| | || || |||| |||||||| || Sbjct 280103 GAGAAGACATATCTGTTCGACGCCATCGACACAATCCCTTGCATTCGCAAGAAAGCAGAC 280044 Query 102138 TGGGCTATGAAGTGGTT-TGATACAAAG--TCGCGTTCCTTTGCTGAGCGACTCTTCGCA 102194 |||||| || ||| | | | |||||| ||| | |||||| | ||||| | || Sbjct 280043 TGGGCTCTGCGATGGATATCAGACAAAGAGTCGAG---CTTTGCCCAACGACTAGTGGCT 279987 Query 102195 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAA 102253 || || || || || |||||||||||||| ||||| ||| | || | ||||| || Sbjct 279986 TTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTT-TGCATCCATCTTCTGGCTGAA 279928 Query 102254 GAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 || ||| || ||||| || ||| ||||||||||||||| ||||||||||||||||| Sbjct 279927 GAGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGG 279868 Query 102314 ACTCCACCAAGAGTTTGCG 102332 | ||| || |||||| Sbjct 279867 CATGCACACGGACTTTGCG 279849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738799694080