Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq91 178 2e-39 seq2 87.8 2e-12 >seq91 Length=177601 Score = 178 bits (196), Expect = 2e-39 Identities = 1050/1659 (63%), Gaps = 63/1659 (4%) Strand=Plus/Plus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 ||||| ||||| || ||||| |||||| || || ||||| | | || | ||| Sbjct 134121 GACTGGGACTGGTCAATGAAGGCACCACGGTCCGCTGCCATTTGCAGGACGGTCCGCTGG 134180 Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTT 109626 || |||||||| || |||||||||| | ||||| || | || | || ||||||| Sbjct 134181 CTGATTTCCCATACGGTCTTGTACAGAGCTTTGATGTCCGCAGGGACGTTGGGGATGTTT 134240 Query 109627 TGAATAGAGCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGACCAGAGACCG 109683 || || ||||| || || | |||| ||| |||||| | | ||||| || || Sbjct 134241 TGGATCGAGCCGCC---CTCGGCGATGATCCGATTCTTCATATTGTCGGACCATAGGCCC 134297 Query 109684 ACCTTTTTGAGATCGT-CAACAAGATGCTTG---TTGACCACGACAAATTCACCAGCAAG 109739 | | |||||| | || || || | ||||| || || ||||| ||||| Sbjct 134298 AAGTCGACGAGATCCTTCAGCA----GCCAGGGATTGACAACCTGGAACTCACCGGCAAG 134353 Query 109740 TGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGAT 109799 || || |||||| |||| ||||| |||||||| || || |||||||| ||||| Sbjct 134354 GACACGGCGAGAGTAGATATTAGATGTGTACGGTTCGAAGCATTCGTTGTTGCCGAGGAT 134413 Query 109800 TTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TC 109857 ||| | ||| || || |||||||||||||| | || ||| ||| || | ||| | | Sbjct 134414 TTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAGTTGCGAATACCATGTTT 134473 Query 109858 GTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTC--TCAC 109915 | | | | ||| | | ||||||||||| |||| | | || | || Sbjct 134474 GGCAATCTCGGCTTTC--AAGGCGTCCCAATC-------CCACAAGTCTGAGGGAGTGAC 134524 Query 109916 CATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGT 109975 || |||||| || |||||| | || | | | || || | | | | || | Sbjct 134525 -ATTCCACATGTCGTATTGAAGAATGCCTTGCGACACTGGGCTGCCTTCGTATGTTTCAT 134583 Query 109976 ACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCT 110035 | | |||| ||| |||| || | ||||| || || ||||| || || |||| Sbjct 134584 ATGTTCCCTGCTCCTTTGCCAGTTCACAAGAAGCAGTGAGAGCAGCATGGTAGATGGTCT 134643 Query 110036 CAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-A 110094 | || || || ||||| | | | ||| | ||||||| ||||||| || | | Sbjct 134644 CGAAGATTTGGATATTCAATTGCCTGGCCTCGGGAGAGTCGAAAGGAAGACG-CAGCGCA 134702 Query 110095 ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAG 110154 | || | || || ||||| ||||| |||||||| | ||| || || | ||| | Sbjct 134703 AGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGAAGTT-GCT 134761 Query 110155 CGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTC 110211 | || | ||| || ||||| ||||| ||||| | | || || || Sbjct 134762 CTTCTTC--GCTTCAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTAGGTTGCGA 134819 Query 110212 GTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAA--CGTTTTCGTCTC---CT 110266 |||||| || |||| ||||| || || | |||| | | ||| ||| || Sbjct 134820 GTCACAACCTGAGTGACCTCATGAAGA----CG--ACCGAAGTCATATTCACCTCGAGCT 134873 Query 110267 TATT-GACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTG 110325 | | ||| || | |||||||| | || || ||||||||||||| ||| || Sbjct 134874 TGGTCGACGAATGTCGGGAGAGCCAGGGAGGCCAGATTGCACACAGCGACCTCATCGGGA 134933 Query 110326 TCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTC 110385 | |||||||| | ||| || || || | ||||| || ||| |||||||||||| Sbjct 134934 GCCGTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCCCAAGTTCTTC 134993 Query 110386 TGATT-CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGT 110444 || || | ||| | ||||| || ||||| |||||||| || || || |||||||| || Sbjct 134994 TGGTTGCTCTTTCTA-TTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGGT 135052 Query 110445 CTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACC 110504 ||||| || ||| || || | ||||| | || ||||| | | | | || Sbjct 135053 CTGTGCCTCGAGGATAGCATACCATAGTTTCTGAGCCTTTACAGTCTGGCGACCACGGCC 135112 Query 110505 TTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACC 110564 |||| ||| || | ||| | | | || || | || || || || | ||| || Sbjct 135113 CTCCTTCTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTCGGCAAGGCC 135172 Query 110565 CTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAA 110624 |||| | ||||||||||| | ||| | | || ||| || | | |||||| Sbjct 135173 AGGTGCCTCATGAGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAA 135232 Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684 || ||||||| ||||||| || |||| | ||| || | | ||||||| | || || Sbjct 135233 CAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTG 135292 Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744 ||| | || | ||||||||| | | || | ||||||||| ||||| |||| || Sbjct 135293 GTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGC 135352 Query 110745 GATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 | | || |||| | || |||| | || ||||| || || |||||| Sbjct 135353 AAAAGCACCTGGGCGCTTATTGCCAC---CCTGATCGACGTAGCGAGCAGTATTATTGAA 135409 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858 ||| | ||||| || |||| || | ||| || || || || ||| ||| Sbjct 135410 GACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCGTTGGTGCCTGCAATGTAGGATCC 135469 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 ||||||||||| ||| || | ||||||||| || || ||| || || Sbjct 135470 TGTGGCACGAATGCAATGGGCATTGAGACCAATACCTCCAGCTGTCTTGGAGATCATGGC 135529 Query 110919 AC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 || | ||| |||| || |||| || || || || ||| | || || |||| | | Sbjct 135530 ACAAGTCT-TGAGGGTGTCATATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGA 135588 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 | || || |||| ||||| |||| ||||| || ||||| || || || | || || Sbjct 135589 AACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGG 135648 Query 111038 TGAA-CAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCG 111096 | || || | |||||||| ||||| || |||| || | ||| | | | Sbjct 135649 TAAAGCACTTC-TGGGACATGAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG 135707 Query 111097 TGAATACCAATGGCAACTCGCATGAACATATATTGAGGC 111135 |||||||| | || || ||||| | ||| | ||| ||| Sbjct 135708 TGAATACCCACTGCCACACGCATAAGCATGTGTTGGGGC 135746 >seq2 Length=1089760 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/228 (70%), Gaps = 11/228 (5%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || || || |||||||||||||| || |||| || || ||||| |||||| | || Sbjct 279868 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTC 279927 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||||| ||| |||||| ||||||||||| || || |||||| Sbjct 279928 TTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCGAAA 279987 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAGAC-TTGTC---GAACCACTTGAGAGCCCAGTT 119689 || | ||| || | || |||| |||| | ||||| | ||| |||||||||| Sbjct 279988 GCCACTAGTCGTTGGGC-AAAGCTCGACTCTTTGTCTGATATCCATCGCAGAGCCCAGTC 280046 Query 119690 GGC---CTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 || ||| || ||||| |||| || | |||||| ||||| || Sbjct 280047 TGCTTTCTTGCG---AATGCAAGGGATTGTGTCGATGGCGTCGAACAG 280091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972583939200