Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 9e-27
seq51 102 2e-16
seq91 93.3 9e-14
>seq1
Length=1383374
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||||| || | ||| | ||| ||| || || || ||||| ||| ||||| | |
Sbjct 702033 AGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGC 701974
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| || || | |||||| || ||||| || || || || ||||| ||||||||||| ||
Sbjct 701973 CCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCC 701914
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| || || || ||||||||| || || ||||| || || ||||| || || |||
Sbjct 701913 TTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTA 701854
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| |||||| || || | || |||||||| | ||||||
Sbjct 701853 ATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816
>seq51
Length=241757
Score = 102 bits (112), Expect = 2e-16
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||| || ||||| || || || || || || || ||||| |||| ||||| | || ||
Sbjct 20491 CAAGACCAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTC 20432
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|||||| ||||| || |||||||| || ||||| ||||| || ||||||||||| |||||
Sbjct 20431 TTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGGGGAATGCCTTCCTTGTC 20372
Query 195048 T 195048
|
Sbjct 20371 T 20371
>seq91
Length=177601
Score = 93.3 bits (102), Expect = 9e-14
Identities = 192/282 (68%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT-GA-AAGA--CAATGGGGA 160644
||||||||||| |||||| | || | |||||| | | || || |||| ||| ||
Sbjct 135259 TTCTACGCCATGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGAAGAACCAA----GA 135204
Query 160645 TTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTT 160704
|||| || |||||||| |||| || ||||| |||| || || |||||| ||||||
Sbjct 135203 ATGGACTCTCTTCTGTCCTCATGAGGCACCTGGCCTTGCCGACGTCTATGGTGACGAGTT 135144
Query 160705 CGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCA 160764
| | |||| || || ||||| || || ||||| | | || || ||||| ||
Sbjct 135143 CAACGCTCTATACGAGAGATATGAGAAGGAGGGCCGTGGTCGCCAGACTGTAAAGGCTCA 135084
Query 160765 AGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATA 160824
|||| ||| || ||||| | || || ||| || | ||||| ||| ||
Sbjct 135083 GAAACTATGGTATGCTATCCTCGAGGCACAGACCGAAACTGGGACGCCCTATATGCTCTA 135024
Query 160825 CAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866
|||||| ||| | | | ||||| |||||||||||||| ||
Sbjct 135023 CAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAACTTGGG 134982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109475004131888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |