Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq91 192 1e-43 seq2 114 2e-20 >seq91 Length=177601 Score = 192 bits (212), Expect = 1e-43 Identities = 1185/1860 (64%), Gaps = 92/1860 (5%) Strand=Plus/Plus Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCAT- 212635 || ||| | ||||| || ||||||||||||||||| || ||| | |||||| |||| Sbjct 134010 GCCGCCATCGTGCGCAGGTAGTACATGCCGGTCTTGAGACCCATTTTCCAGCC-TGCAAA 134068 Query 212636 GTGCATTGCT-GTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTA 212694 |||||| ||| |||| |||| | | | |||| || | || || | Sbjct 134069 GTGCAT-GCTCGTGA---TCTTGCCCATGGT----TGGT-----TCTTT---CAAGTGGA 134112 Query 212695 GGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATAT 212754 ||| || ||||| |||||| ||||| | | | ||| || ||||| | | || Sbjct 134113 TGTTGAGAGACTGGGACTGGTCAATGAAGGCACCACGGTCCGCTGCCATTTGCAGGACGG 134172 Query 212755 CTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGG 212814 | |||| || ||||| ||||||||| | | |||||| |||| | |||| | || Sbjct 134173 TCCGCTGGCTGATTTCCCATACGGTCTTGTACAGAGCTTTGATGTCCGCAGGGACGTTGG 134232 Query 212815 GGATGTTCTGCACAGACCC--CCTGTGT-ATGGTCAGCTGCAGGCGCATGTCCTCGTTCC 212871 ||||||| || | || || ||| | ||| || | | | ||| | ||| || Sbjct 134233 GGATGTTTTGGATCGAGCCGCCCTCGGCGATGATCCGATTCTT---CATATTGTCGGACC 134289 Query 212872 AGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTG 212931 | |||||| | | || ||| | ||| || ||||| | |||||| ||||| | Sbjct 134290 ATAGGCCCAAGTCGACGAGATCCTTCAGCAGCCAGGGATTGACAACCTGGAACTCACCGG 134349 Query 212932 AGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCA 212991 || || | | ||| | || || ||||| || |||| || |||||||| || | Sbjct 134350 CAAGGACACGGCGAGAGTAGATATTAGATGTGTACGGTTCGAAGCATTCGTTGTTGCCGA 134409 Query 212992 GAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051 | || || | ||| ||| |||||||||||||| || |||||| ||| | | || | Sbjct 134410 GGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAGTTGCGAATACCAT 134469 Query 213052 GCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCC 213110 | | | | || ||| ||| | |||| ||||| || ||| | Sbjct 134470 GTTTGGCAATCTCGGCTTTCAAGGCGT-CCCAATCCCA---------CAAGTCTGAGGGA 134519 Query 213111 TTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAG 213170 | || ||||||||||| | || | ||||||| ||| |||||||| | ||| | Sbjct 134520 GTGACATTCCACATGTCGTATTGAAGAATGCCTTGCGACACTGGGCTGCCTTCGTATGTT 134579 Query 213171 GAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATG 213230 || | || |||||||| ||||| || || || || || ||||| | ||||||| Sbjct 134580 TCATATGTTCCCTGCTCCTTTGCCAGTTCACAAGAAGCAGTGAGAGCAGCATGGTAGATG 134639 Query 213231 GTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATG 213290 || || || || | | || | | | ||||||| || || ||| || | || | Sbjct 134640 GTCTCGAAGATTTGGATATTCAATTGCCTGGCCTCGGGAGAGTCGAAAGGAAGACGCA-G 134698 Query 213291 CGTT-GGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349 || |||| | || || || || || || |||| |||| ||||| ||||| | ||| Sbjct 134699 CGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGAAGTT 134758 Query 213350 AGACTTGGAGCACTCCTCCAAGG----GGTAAAAGTTGCAGTCGATGATCTTGTTGAGGT 213405 ||| | || || || |||| ||||| ||||| |||||||| |||| Sbjct 134759 GCTCTT----CTTCGCTTCAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTAGGT 134814 Query 213406 TGCGGGTGGCCACTTTGGTGAC---ATG--GGCCAG-GTACTCGTGATTGAACACGTAGC 213459 |||| || | || | ||||| ||| | | | | | || | ||| | | || ||| Sbjct 134815 TGCGAGTCACAACCTGAGTGACCTCATGAAGACGACCGAAGTCAT-ATTCACCTCG-AGC 134872 Query 213460 CCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT 213519 ||| || || || || || | | |||||| ||||| || || ||||| | Sbjct 134873 TTG-GTCG---ACGAATGTCGGGAGAGCCAGGGAGGCCAGATTGCACACAGCGACCTCAT 134928 Query 213520 -GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGG 213578 | ||| | ||||| || | ||||| ||||| || ||| || ||||||||| |||| | Sbjct 134929 CGGGAGCC-GTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCCCAAG 134987 Query 213579 TTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTC 213638 |||| ||||| |||| ||| | |||||||||||||| ||||| | ||| || Sbjct 134988 TTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTT 135047 Query 213639 TCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACA 213698 || ||| | | | || || ||| || | | ||||| || | ||| | Sbjct 135048 TCGGTCTGTGCCTCGAGGATAGCATACCATAGTTTCTGAGCCTTTACA----GTCTGGCG 135103 Query 213699 GCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCT 213757 | ||| | | ||| || ||||| || ||||||| |||| || |||| Sbjct 135104 ACCACGGCCCTCCTTCTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTC 135163 Query 213758 GTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACT 213815 | | || || || | ||| || ||| | ||| |||| || || | |||| ||| Sbjct 135164 GGCAAGGCCAGGTGCCTCATGAGG-ACAGAAGAGAGTCCATTCTTGGTTCTTCTC-GACA 135221 Query 213816 CTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCG 213875 | | |||||||| ||| || ||||| ||| ||||| ||| | | || ||| Sbjct 135222 CGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCT 135281 Query 213876 TCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCC 213935 ||| || ||| || | ||| | | |||||| || | ||| |||||||| ||||| Sbjct 135282 TCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCG 135341 Query 213936 ATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCAC-CAGCCTGGCCAC 213991 | |||||||||||| || || | || | ||||| ||||| || || ||| | || Sbjct 135342 AGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACGTAGC--GAGCAG 135399 Query 213992 CA-TGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTA 214050 | | ||||||| ||| || | ||| | ||||||||||| |||||||| || || | Sbjct 135400 TATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCGTTGGTGCCTGCAA 135459 Query 214051 TATACGAGCCGGAGGCCCTCAGG--TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTT 214108 | || || || | ||| | | | || ||| |||| || || || || || ||| Sbjct 135460 TGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGA--CCAATACCTCCAGCTGTCTT 135517 Query 214109 GGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAG 214168 |||||||||||| || | | | || || || || | |||||||| ||| | | Sbjct 135518 GGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATGCTGTCTTCTTTCAT 135577 Query 214169 GTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG--CCAGAGTTGAAAAGCGTG 214226 || | |||||| ||| || || || || | || | | || | ||||||||| ||| Sbjct 135578 GTCAATCAAGAAACAGGAGGACAGTTGAGG--TTGAGGGGTTCCGGCGTTGAAAAGGGTG 135635 Query 214227 GGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGG 214286 || || ||| | | |||| | || | ||| |||| ||||| | | | Sbjct 135636 GGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTGTACGTCTCGATGGCCTTTTCA 135695 Query 214287 ATGTCGTGCTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTGGGGCCTCTCTAT 214345 || |||| |||| || | || ||| | ||| |||||||| ||||||| || Sbjct 135696 ATATCGTCGCTGTGAATACCCACTGC-CACACGCATAAGCATGTGTTGGGGCCGTTC--- 135751 Query 214346 GGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 | ||| ||| |||||||||||| || | |||||| |||||||| ||||| || Sbjct 135752 AGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCCAGCGTCTTGAAACCAAAATA 135811 >seq2 Length=1089760 Score = 114 bits (126), Expect = 2e-20 Identities = 223/327 (68%), Gaps = 12/327 (4%) Strand=Plus/Plus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| ||||||||| |||||| ||| ||||| || ||||||| ||||||||||| ||| Sbjct 279846 GCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 279905 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 || ||||| | || | || |||||||| || | || || || ||||||||||| Sbjct 279906 GCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAA 279965 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 |||||| || || || ||||| || || | | | || | | |||||||| Sbjct 279966 GATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCTGA 280025 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 ||||| || ||||||||||| ||||| ||||| || || || || ||||| Sbjct 280026 TATCCATCGCAGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTCGATGGCGTC 280085 Query 48370 GAAGAGCT---TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGC 48423 ||| || | |||| ||| | |||| |||||||| | |||| || | Sbjct 280086 GAACAGATATGTCTT---CTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAGGCT--- 280139 Query 48424 GTACATCTCAGAGTGCACATTCTCTAT 48450 |||||| || ||||| | |||||| || Sbjct 280140 GTACATTTCCGAGTGGATATTCTCCAT 280166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527397109760