Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq91 114 4e-20 >seq91 Length=177601 Score = 114 bits (126), Expect = 4e-20 Identities = 341/522 (65%), Gaps = 13/522 (2%) Strand=Plus/Plus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 ||||||| ||||||||| ||| || || || || |||||| || || |||||||||| Sbjct 134938 TGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGT 134997 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || || || || || |||||||| || || || || || || || || |||||| Sbjct 134998 TGCTCTTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTG 135057 Query 155749 CGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCG 155808 | || || || ||| || | | || || | || | | ||| ||| Sbjct 135058 CCTCGAGGATAGCATACCATAGTTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCT 135117 Query 155809 ACTCATATTTCA--TATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG 155866 ||||||| || |||| |||||| | | || ||||| || || || ||||| Sbjct 135118 TCTCATATCTCTCGTATAGAGCGTT--GAACTCGTCACCATAGACGTCGGCAAGGCCAGG 135175 Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTT---TATTACCGATTACACGCTCCATAAA 155923 || || || || || || | ||| || | || ||| |||| ||||| || Sbjct 135176 TGCCTCATGAGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGA---CACGTTCCATGAA 135232 Query 155924 TACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTG 155983 | ||| | ||| || || ||||| | ||| | ||| | ||| || | |||||| Sbjct 135233 CAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTG 135292 Query 155984 ATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGC 156043 ||||| | || | || || || | || | || |||||| || || || || Sbjct 135293 GTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGC 135352 Query 156044 AAAACTACCATTCCTCTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGAC 156100 |||| ||| | ||| |||||||||||| || || |||||||| ||||||||||| Sbjct 135353 AAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGAC 135412 Query 156101 ACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142 | ||||| || |||| || ||||| ||||| ||||| || Sbjct 135413 GCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCGTTGGTGCC 135454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471808850044368