Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq91 120 4e-21
seq78 114 2e-19
seq2 95.1 1e-13
seq106 93.3 5e-13
>seq91
Length=177601
Score = 120 bits (132), Expect = 4e-21
Identities = 202/290 (70%), Gaps = 2/290 (1%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
||| ||||||||||| || || | || |||||||| |||||||| | || ||||||||
Sbjct 135380 CTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGA 135439
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|||||||||||| || | ||||| || | ||| || | || || | ||
Sbjct 135440 GGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGACC 135499
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || || || | ||||||||| | || || ||||| ||||| || || |||||
Sbjct 135500 AATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTC 135559
Query 1630245 GATCGAGTCGGCCTTCATGTCCA-CGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303
||| ||| | |||||||| | | ||||| || || || ||| || || | || |
Sbjct 135560 GATGCTGTCTTCTTTCATGTCAATCAAGAAA-CAGGAGGACAGTTGAGGTTGAGGGGTTC 135618
Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATG 1630353
|||||||||| || ||||||| || ||| || ||| | | ||||||
Sbjct 135619 CGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATG 135668
Score = 89.7 bits (98), Expect = 6e-12
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507
||| || | |||| ||||||| ||||| || | |||||| || | ||| |||||
Sbjct 135227 CATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTT 135286
Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567
||||||||||||| | |||| | |||||| | ||| |||||||| ||||| |||||
Sbjct 135287 GCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTA 135346
Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTT 1628591
| |||||| || || ||||||
Sbjct 135347 GATGGCAAAAGCACCTGGGCGCTT 135370
>seq78
Length=197218
Score = 114 bits (126), Expect = 2e-19
Identities = 101/126 (80%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227
|| || ||| | || || || || ||||| ||||| ||||| || |||| ||| | ||
Sbjct 11401 CTTTTCGAGATCATTCTGGCGGCAAACTATCTCGATATCAAAGCTTTGCTGGATGTCGGC 11460
Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287
|||||| |||| |||||||||||||||||||||||||| |||||||| || ||||| ||
Sbjct 11461 TGCAAGACTGTCGCCAACATGATCAAGGGCAAGTCGCCGGAGGAGATACGTAAGACGTTC 11520
Query 1592288 AACATC 1592293
|| |||
Sbjct 11521 AATATC 11526
>seq2
Length=1089760
Score = 95.1 bits (104), Expect = 1e-13
Identities = 196/279 (70%), Gaps = 17/279 (6%)
Strand=Plus/Plus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| ||||| ||| ||| | |||||| |||| |||||||||||| || || ||
Sbjct 279868 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTC 279927
Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC-AA 869297
|| ||||| ||||||| ||| || || ||||| |||||||| |||||||| || ||
Sbjct 279928 TTCAGCCAGAAGATGGATGCA-AAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCGAA 279986
Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT-TG--ATCCACTTCATCG 869354
|||| | || || | ||||||| |||| ||| |||| || ||||| || |
Sbjct 279987 AGCC-ACTAGTCGTTGGGCAAAG--CTCGA----CTCTTTGTCTGATATCCATCGCAGAG 280039
Query 869355 CCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCG-CGAA-AGAGGTGGTC 869412
||||||| || || || | | | || | |||||||||||| |||| ||| ||
Sbjct 280040 CCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTCGATGGCGTCGAACAGATATG--T 280097
Query 869413 CTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAG 869451
||| || |||||||| ||||||||||| || || ||
Sbjct 280098 CTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAG 280136
>seq106
Length=148855
Score = 93.3 bits (102), Expect = 5e-13
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 1852499 TTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGA 1852558
|||||||| |||| | ||| |||| ||||||||||||||||||||| || ||||
Sbjct 137309 TTGTCGAGAAACCCGTGAATGTCCGCAAGGAGGATCTTGACCCGACAGCCCGCTCGGAGG 137368
Query 1852559 AAGTCGGCCAGTTTGAAGATGGGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCC 1852618
|||| || | ||| | || ||||| |||||||| |||||| | || |||| ||
Sbjct 137369 AAGTGCGCAATTTTCATCATCGGCACGAAGTAGCCGCAGTGCGGTCTTCCTGTCGTAGCA 137428
Query 1852619 GTGCCCCAATATATGATCA 1852637
|||||||| || || ||||
Sbjct 137429 GTGCCCCAGTAGATTATCA 137447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107101121987088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |