Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq91 150 2e-31 seq1 104 2e-17 >seq91 Length=177601 Score = 150 bits (166), Expect = 2e-31 Identities = 571/872 (65%), Gaps = 33/872 (4%) Strand=Plus/Plus Query 139084 GAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACAC 139143 ||||| | |||||||| || || || ||||| | ||||||||||||| || | || Sbjct 134901 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 134960 Query 139144 AAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCT 139203 | ||| | ||| || || || || | || ||||| |||| || || || || Sbjct 134961 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 135020 Query 139204 TTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT-GAATTTGAACA- 139261 ||||| |||||||| || || |||||||| |||| ||| | || | || | || Sbjct 135021 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCAT---ACCAT 135077 Query 139262 AGTCCCT-AGCTTGTA---TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAG 139317 ||| || ||| | || | || || | | | | || ||| || | ||||| Sbjct 135078 AGTTTCTGAGCCTTTACAGTCTGGCGACC---ACGGCCCTCCTTCTCATATCTCTCGTAT 135134 Query 139318 AGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACAT 139376 || ||| ||| |||| |||| ||| |||| | ||| | | || | |||||| | Sbjct 135135 AGAGCGTTGAACTCGT-CACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAA 135193 Query 139377 GAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGC 139436 ||| | |||| | |||| || ||| || |||||||| || ||| |||||| || Sbjct 135194 GAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGC 135253 Query 139437 GAACAGCAAATCGCGCGCCTTCTTA--TCTTCCGAACCCATGTTACGTTTCATGTTAAGG 139494 | | | ||| ||||| || ||| | |||||| || ||| | ||| ||| | Sbjct 135254 GTAGAACAAGTCGCGTGC--TCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAA 135311 Query 139495 AAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---T 139551 || || || ||||| ||||||||||| || || |||||||| | || ||| || Sbjct 135312 AAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTA 135371 Query 139552 TTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGA 139611 |||||||| |||||||||| || ||| ||||||||| ||||| | ||| || || Sbjct 135372 TTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGC 135431 Query 139612 CCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGACTGTTGCGAGCTCGGACGTCATGTA 139669 ||| | | || |||||||||| ||| ||| | || | || || | | ||| Sbjct 135432 CCGTTGGAGGTGCCGTTGGTGCCTGCAATGTAGGA-TCCTGTG-GCACGAATGCAATGGG 135489 Query 139670 CATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCG 139728 |||||| || || || || | ||||| || | | ||| || | | || || Sbjct 135490 CATTGAGACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTG-AGGGTGTCA 135548 Query 139729 TATATACCTCTTATGCTGTCGTCCTGCATCGTGA--CCAGAAAGCATGACGAAAGTTGCG 139786 ||||| || |||||||| || | ||| || | | ||||| || || || ||||| | Sbjct 135549 TATATTCCCTCGATGCTGTCTTCTTTCAT-GTCAATCAAGAAA-CAGGAGGACAGTTGAG 135606 Query 139787 GTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGAC 139845 || | || ||||| || || || || ||||| || || || || | ||| Sbjct 135607 GTTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTT-CTGGGAC 135665 Query 139846 ATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACT 139905 || | | |||||| |||||||| | ||||||| | ||| ||||| || | || Sbjct 135666 ATGAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACA 135725 Query 139906 CGCATCAGCATATGTTGGATCCGTTCGGCCAC 139937 ||||| ||||| |||||| |||||| || || Sbjct 135726 CGCATAAGCATGTGTTGGGGCCGTTCAGCAAC 135757 >seq1 Length=1383374 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || || ||||| || || ||| | | | Sbjct 701588 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATCACGCTGGAGGTTGAATCGAGC 701647 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || ||||| || Sbjct 701648 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGGATCCCGCCCGACCAG 701707 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||| || || ||||||||||| | | | || || || ||| Sbjct 701708 CAGCGCCTGATCTTTGCAGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAAC 701767 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||||||||| || || | ||| | || | ||||| || Sbjct 701768 ATCCAGAAGGAATCGACGCTCCATCTCGTGCTCCGGCTCCGCGGCGG 701814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894990593920