Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq91 104 4e-16
seq2 102 1e-15
seq78 96.9 5e-14
seq60 91.5 2e-12
>seq91
Length=177601
Score = 104 bits (114), Expect = 4e-16
Identities = 179/260 (69%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||| ||||| ||||| || || | || |||||||| |||||||| | ||| ||||||||
Sbjct 135380 CTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGA 135439
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||||||| || | ||||| || | ||| || | || || | ||
Sbjct 135440 GGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGACC 135499
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || || | ||||||||| | || || | || || || || || || |||||
Sbjct 135500 AATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTC 135559
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| ||| | |||||||| | || || || || || ||| || | | || ||
Sbjct 135560 GATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCC 135619
Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799
||| ||||| || |||||||
Sbjct 135620 GGCGTTGAAAAGGGTGGGCG 135639
Score = 89.7 bits (98), Expect = 8e-12
Identities = 277/432 (64%), Gaps = 12/432 (3%)
Strand=Plus/Plus
Query 2071578 GACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTG 2071635
||| | ||| ||||| || |||| | ||| |||| |||| ||||| |||||||||
Sbjct 134945 GACAATCTCAGTGCAAAGATTGGAG--CTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTC 135002
Query 2071636 GTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTG 2071695
| ||| ||||||||||| ||||| ||||||| || || ||| |||| ||| |
Sbjct 135003 TTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCG 135062
Query 2071696 ACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCTNNNN 2071751
| ||| || |||| | || | || || | || ||| |||||||
Sbjct 135063 AGGATAGCATACCATAGTTTCTGAGCCTTTACAGT----CTGGCGACCACGGCCCTCCTT 135118
Query 2071752 NNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGC 2071811
| || |||| || || | || | | ||| ||||| || ||
Sbjct 135119 CTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGC 135178
Query 2071812 CTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTC 2071871
||| || || ||||| | ||| || | || | || || ||| |||| |||
Sbjct 135179 CTCATGAGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTC 135238
Query 2071872 GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTT 2071931
||||||| | |||| || | ||||| || | ||| |||||||||||||||||
Sbjct 135239 AGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTT 135298
Query 2071932 TTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGC 2071991
| |||||| | |||||| | ||| |||||||| ||||| |||||| |||||| ||
Sbjct 135299 TCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGC 135358
Query 2071992 GCCCTTGCGCTT 2072003
|| ||||||
Sbjct 135359 ACCTGGGCGCTT 135370
>seq2
Length=1089760
Score = 102 bits (112), Expect = 1e-15
Identities = 216/311 (69%), Gaps = 21/311 (7%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| ||||| ||| ||| | |||||| ||| |||||||||||| || || ||
Sbjct 279868 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTC 279927
Query 794401 TTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC- 794456
|| ||||| ||||||| || || | | | ||||| |||||||| |||||||| ||
Sbjct 279928 TTCAGCCAGAAGATGGATGCAAAGGATC---CAGAGAAGAAGATGCCTTCGACGGCTGCG 279984
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT-TGAT--CCACTTCAT 794513
|||||| || || || | |||||| | | | |||||||| |||| ||| ||
Sbjct 279985 AAAGCC-ACTAGTCGTTGGGCAAAGCT--CGA----CTCTTTGTCTGATATCCATCGCAG 280037
Query 794514 CGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG-CGAA-AGAGGTGG 794571
||||| ||||| || || | | | || | |||||||||||| |||| ||| ||
Sbjct 280038 AGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTCGATGGCGTCGAACAGATATG- 280096
Query 794572 TCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGG 794631
|||||| |||||||| || |||||||| ||||| || ||| | || ||||||
Sbjct 280097 -TCTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAGGCTGTACATTTCCGAGTGG 280155
Query 794632 ATGTTTTCGAT 794642
|| || || ||
Sbjct 280156 ATATTCTCCAT 280166
>seq78
Length=197218
Score = 96.9 bits (106), Expect = 5e-14
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 2035614 GTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCC 2035673
||||||||| | || || ||| | || || || || ||||| ||||| ||||| |
Sbjct 11386 GTCGACCAAGAAATGCTTTTCGAGATCATTCTGGCGGCAAACTATCTCGATATCAAAGCT 11445
Query 2035674 CTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGAC 2035733
| || ||| | || |||||||| || |||||| | ||||||||||||||||| |||||
Sbjct 11446 TTGCTGGATGTCGGCTGCAAGACTGTCGCCAACATGATCAAGGGCAAGTCGCCGGAGGAG 11505
Query 2035734 ATCCGCAAGACCTTTAACATC 2035754
|| || ||||| || || |||
Sbjct 11506 ATACGTAAGACGTTCAATATC 11526
>seq60
Length=225368
Score = 91.5 bits (100), Expect = 2e-12
Identities = 126/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||| ||||| ||||||||||||||||| || ||||||||| |||| ||||| || |||
Sbjct 165191 GTATTTGGTCACGGCCTTGGTACCCTCGGACACGGCGTGCTTGGCGAGTTCACCAGGCAG 165250
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| || | |||| || |||||||| |||| | ||| ||| |||||| || |
Sbjct 165251 GATGAGTCTGACGGATGTTTGGATCTCTCGGGAGGAGATTGTGGACTTCTTGTT-GTAGG 165309
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACG 1485643
| || || | ||| |||||| ||| || |||| ||||| |||||||
Sbjct 165310 CAGCAAGCTTGGAGGCTTCGGTGGCGACACGCTCGAAGATGTCTGAAACAAACG 165363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916197042203696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |