Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq2 104 2e-17
seq1 91.5 1e-13
>seq2
Length=1089760
Score = 104 bits (114), Expect = 2e-17
Identities = 230/338 (68%), Gaps = 19/338 (6%)
Strand=Plus/Minus
Query 50277 TTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTT 50336
|| ||| |||| ||||||| || || || ||||| | || || || || ||||
Sbjct 280007 TTTGCCCAACGACTAGTGGCTTTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTT 279948
Query 50337 GCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAG 50396
||| |||| || | | || | | ||| | |||||||||||||| || |||||||
Sbjct 279947 GCATCCATCTTCTGGCTGAAGAGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAACGAG 279888
Query 50397 TTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTG---TTTG-TACTACAATAC 50452
| || || || ||||| || |||||||| ||||||||||| |||| | | || ||
Sbjct 279887 CTCATCTCTCGTGACGAGGGCATGCACACGGACTTTGCGTGCCTTTTGATGCAAC-ATCT 279829
Query 50453 GC-GCGTAA--ATGAAAAATTA-TCATACGAAACAATTTTGGACATGTTCAAAGAAGCCG 50508
|| || || || | | |||| ||||| |||| | | |||||||
Sbjct 279828 GCAGCACAAGCCGGACCCACAACTCAT-CGAAA---------ACATTATAACCGAAGCCG 279779
Query 50509 TCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACG 50568
|| |||||||| || || |||| || || | ||||| ||| || | |||||||||
Sbjct 279778 TCAGGATCGAAAAGGAATTCCTCACCGATGCCCTCCCCGTCGCACTGCTCGGCATGAACT 279719
Query 50569 CAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGAC 50606
| | | ||||| ||||||||||||||||||| |||
Sbjct 279718 CGAAGCTCATGTGTCAGTACATTGAGTTTGTTGCTGAC 279681
>seq1
Length=1383374
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| || || || || |||||||| ||| || |||| |||||||||||| || ||
Sbjct 701556 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCCG 701497
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
|| ||||||| || ||||| || || || ||||| || ||||| || || |||
Sbjct 701496 GCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGATTTG 701437
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | |||||| ||| || || |||| || | |||||||| || | |||
Sbjct 701436 ACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTC 701377
Query 137395 TTTACGAATATTTGCATAGC 137414
|| ||||| |||||||| ||
Sbjct 701376 TTCACGAAGATTTGCATGGC 701357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488541166444800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |