Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 104 5e-17 >seq1 Length=1383374 Score = 104 bits (114), Expect = 5e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || ||||| ||||| || || || || || || | | ||||| || || || Sbjct 701790 TGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGC 701731 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| || | || || || || || || |||||||| || || ||||| Sbjct 701730 TTGCCTGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCCTGGATCTT- 701672 Query 82728 GCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||| || || || || ||||| || | | ||| || |||| || ||||||||||| || Sbjct 701671 GCTCTTGACGTTGTCGATCGTGTCGCTCGATTCAACCTCCAGCGTGATCGTCTTGCCAGT 701612 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || || ||||| Sbjct 701611 AAGTGTCTTTACGAAGATTTGCAT 701588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981821363037296