Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq91 192 6e-44
seq2 125 7e-24
seq1 123 2e-23
seq17 105 6e-18
seq112 91.5 1e-13
>seq91
Length=177601
Score = 192 bits (212), Expect = 6e-44
Identities = 1117/1757 (64%), Gaps = 59/1757 (3%)
Strand=Plus/Plus
Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GTCGCTTTA 148110
|||||| |||||||||||| || |||||||| || ||||||| | || ||| | |
Sbjct 134121 GACTGGGACTGGTCAATGAAGGCACCACGGTCCGCTGCCATTTGCAGGACGGTC-CGCTG 134179
Query 148111 TCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGC 148170
| | || ||||| | ||||||||||| ||||| | | || | | | ||||
Sbjct 134180 GC-TGATTTCCCATACGGTCTTGTACAGAGCTTTGATGTCCGCAGGGACGTTGGGGATGT 134238
Query 148171 GCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGA 148230
|| | |||||||| | || | ||| |||| ||| | ||| | ||||| |
Sbjct 134239 TTTGGATCGAGCCGCCCTCGGCGATGATCCGATTCTTCATATTGTCGGACCATAGGCCCA 134298
Query 148231 GCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGC 148290
|||| || || | | ||| | |||| || ||||| ||||| ||||| || || |
Sbjct 134299 AGTCGACGAGATCCTTCAGCAGCCAGGGATTGACAACCTGGAACTCACCGGCAAGGACAC 134358
Query 148291 GCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349
| || ||| || | || || ||||||| || | ||||||||||| | || ||
Sbjct 134359 GGCG-AGAGTAGATATTAGATGTGTACGGTTCGAAGCATTCGTTGTTGCCGAGGATTTGA 134417
Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409
| |||| || ||||||||| || || || || |||||||| | ||| | ||
Sbjct 134418 GAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAGTTGCGAATACCATGTTTGGCA 134477
Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469
|| | | |||| || |||| ||||| | || || || || ||||||||||||
Sbjct 134478 ATCTCGGCTTTCAAGGCGTCCCAATCCCACAAGTCTGAGGGAGTGACATTCCACATGTCG 134537
Query 148470 TACTGCAGAATGCC--GCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527
|| || |||||||| ||| | | |||||||| ||||| | || | ||| |||
Sbjct 134538 TATTGAAGAATGCCTTGCGAC--ACTGGGCTGCCTTCGTATGTTTCATATGTTCCCTGCT 134595
Query 148528 CCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCC 148587
|| |||||||| || || ||| || | | ||| || |||||| |||||
Sbjct 134596 CCTTTGCCAGTTCACAAGAAGCAGTGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGA 134655
Query 148588 TGTTGAGCAGCGCCGCCGACTCG---CTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644
| || | | ||| | |||| ||| | || | ||||||| | || ||||
Sbjct 134656 TATTCA--ATTGCC-TGGCCTCGGGAGAGTCGAAAGGAAGACGCAGCGCAAGGAAGGCGT 134712
Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704
|||| || || || || || | || | ||| |||||| | |||| |||
Sbjct 134713 CGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGAAGTTGCTCTTCTTCGCTT 134772
Query 148705 TCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTG 148764
|| || |||| |||| ||||| ||||||| || ||||| ||| |||| |
Sbjct 134773 CAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTAGGTTGCGAGTCACAACCTGAG 134832
Query 148765 TAA--TTCTG--------CGCAG-CA-ATTCAAAATCGTACTTGTCATCTACG-ATGCAT 148811
| | | || || || || |||| | ||| |||| || ||| ||| |
Sbjct 134833 TGACCTCATGAAGACGACCGAAGTCATATTC-ACCTCGAGCTTG--GTCGACGAATG--T 134887
Query 148812 CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCT 148871
||| | || | ||||| ||||||||||| || |||||| || || |||| ||
Sbjct 134888 CGG--GAGAGCCAGGGAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCG 134945
Query 148872 ACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTG 148931
|| ||||| | ||| |||||| || | ||| |||| |||||| || ||||||||
Sbjct 134946 ACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTT 135005
Query 148932 CTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCA-- 148989
|| ||||| ||||||||||| ||||| || || |||||||| ||| | || |
Sbjct 135006 CTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGG 135065
Query 148990 CTATGAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGT 149049
|| | | || || | ||| || || ||| || ||||||| ||| |
Sbjct 135066 ATAGCATACCAT--AGTTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCTTCTCAT 135123
Query 149050 A--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTT 149107
| | ||||| ||| | |||| | || || ||| ||| | || || || ||
Sbjct 135124 ATCTCTCGTATAGAGC--GTTGAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTC 135181
Query 149108 GTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGG 149167
|| || || | ||| | ||| | || | | || || | ||| |||| || ||
Sbjct 135182 ATGAGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGG 135241
Query 149168 CACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCG 149227
||| | ||||| | | |||||| || | ||||| ||| ||| |
Sbjct 135242 AGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCT 135301
Query 149228 CAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC 149287
|||||| | | | ||| | ||| |||||||| ||||| | ||| | || | || ||
Sbjct 135302 CAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACC 135361
Query 149288 CTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCAT 149344
|||| ||||| ||||| ||||||| ||| | | || || || || |||| |||
Sbjct 135362 TGGGCGCTTATTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCAT 135421
Query 149345 AGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATG--CGA--CTGCCGCGCGCTC 149400
|| || || ||| |||||||| || |||| || ||| || ||
Sbjct 135422 GGGGATAAGCCCGTTGGAGGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAAT 135481
Query 149401 GCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGTC 149458
||| || ||| |||| || || || || || || ||| ||||| || | ||||
Sbjct 135482 GCA--ATGGGCA--TTGAGACCAATACCTCCAGCTGT-CTTGGAGATCATGGCACAAGTC 135536
Query 149459 GCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGA 149518
||| || || || |||||||||||||| |||||| | || || || ||
Sbjct 135537 -TTGAGGGTGTCATATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGA 135595
Query 149519 GCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATA 149578
| ||| ||| || | | || ||||| ||| | |||||| ||||| ||||| |
Sbjct 135596 GGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCA 135655
Query 149579 TTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCC 149638
|||||| ||| | | ||||| ||||| | || || || |||| || || ||
Sbjct 135656 CTTCTGGGACATGAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACC 135715
Query 149639 TATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAG 149698
| || || ||||| ||||| || || || || || || |||| || ||||| |||||
Sbjct 135716 CACTGCCACACGCATAAGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAG 135775
Query 149699 CAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTG 149758
|| ||| | || || |||||| | ||||| || | ||||| ||||| ||| |||
Sbjct 135776 CAGGTATGATCTCTCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTA 135835
Query 149759 GTCAATGGCGGCGTCGA 149775
| |||| || | || ||
Sbjct 135836 GACAATTGCAGAGTTGA 135852
>seq2
Length=1089760
Score = 125 bits (138), Expect = 7e-24
Identities = 278/411 (68%), Gaps = 21/411 (5%)
Strand=Plus/Plus
Query 120465 GAGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAG 120524
|||||| ||||| || |||||||||||||||| |||||| || || ||||||||| ||
Sbjct 279672 GAGCAGACGGTCAGCAACAAACTCAATGTACTGACACATGAGCTTCGAGTTCATGCCGAG 279731
Query 120525 CAACGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAA 120584
|| || || || | || |||| || ||||| || || || || || | |
Sbjct 279732 CAGTGCGACGGGGAGGGCATCGGTGAGGAATTCCTTTTCGATCCTGACGGCTTCGGTTAT 279791
Query 120585 CATGG---CGAGCA-TAGTGTGGCCGGGCATCTTGTGTTC--GATGCGCGTTCGGTAGTA 120638
||| ||| | | ||| | |||| |||||| | |||| || |
Sbjct 279792 AATGTTTTCGATGAGTTGTGGGTCCGG----CTTGTGCTGCAGATGTTGCATCA-----A 279842
Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698
|||||||||||||||||||||| ||||||||| || || || ||||||||| || ||
Sbjct 279843 AAGGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGT 279902
Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758
||||||||||| | ||||| |||| | |||| |||| |||||| || || ||
Sbjct 279903 GAGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAA 279962
Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818
||| | ||| || ||| || || || || | || | ||| || ||| | |||| |
Sbjct 279963 GAAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGAC-TCTT--T 280019
Query 120819 GTC---GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866
||| ||||| || ||||| || || || ||||| | ||| || ||
Sbjct 280020 GTCTGATATCCATCGCAGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGAT 280070
>seq1
Length=1383374
Score = 123 bits (136), Expect = 2e-23
Identities = 148/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||| ||||| ||||| || ||||| ||| || ||| ||| ||||| ||||||||
Sbjct 701557 GGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCC 701498
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| || |||||||| |||||||| |||||| ||
Sbjct 701497 GGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGATTT 701438
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||||| ||| ||| || || | |||| ||| ||||| || || ||
Sbjct 701437 GACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGT 701378
Query 133643 TTTTACGAAAATCTGCATGGC 133663
|| ||||| || ||||||||
Sbjct 701377 CTTCACGAAGATTTGCATGGC 701357
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528
||| ||||| || ||||| |||| | || | |||||| | ||||||||||||| |
Sbjct 702007 CTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAA 701948
Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588
||| |||||||||||||| ||||| ||||| |||||||| |||||| ||||| |
Sbjct 701947 AATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 701888
Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648
|| | |||||| | | |||||| || | || | || ||||| || || || |||||
Sbjct 701887 GTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTAC 701828
Query 133649 GAAAATCTGCAT 133660
||| || |||||
Sbjct 701827 GAAGATTTGCAT 701816
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| || || ||||| || ||||| || | |||| |||||| |||||||||||
Sbjct 701784 GTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTGCCT 701725
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | || || |||||||||||||| ||||| ||||||||||| |||||| ||||
Sbjct 701724 GCAAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCCTGGATCTTGCTCTTG 701665
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | ||||||| | | || || || | |||| || ||||| || || ||
Sbjct 701664 ACGTTGTCGATCGTGTCGCTCGATTCAACCTCCAGCGTGATCGTCTTGCCAGTAAGTGTC 701605
Query 133644 TTTACGAAAATCTGCATG 133661
|||||||| || ||||||
Sbjct 701604 TTTACGAAGATTTGCATG 701587
>seq17
Length=408214
Score = 105 bits (116), Expect = 6e-18
Identities = 133/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| || ||||| |||| || || | | | || || || |||||||| ||| | ||
Sbjct 190084 TTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCA-TCTTCAAGTTGCTTGCCGGCGAAGAT 190026
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
| |||||||||||||| ||||||||||||||||| |||||| ||||| | ||
Sbjct 190025 CAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTC 189966
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| |||||||| | ||| || || | ||||| ||| ||||| || || || || |||||
Sbjct 189965 GATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 189906
>seq112
Length=144762
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| || || ||||| || ||||| || | |||| |||||| ||||||||||||
Sbjct 45903 GTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTGCCC 45962
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | || || ||||||||||||| | ||| ||||||||||| ||||| ||||
Sbjct 45963 GCAAAGATCAGGCGCTGCTGGTCGGATGTGATCCCTTCCTTGTCCTAAATCTTGCTCTTG 46022
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | | | |||||| | | ||| || || | |||| || ||| | || || ||
Sbjct 46023 ATGTTGTTGATTGTGTCGCTCGACTCAACCTCCAGCGTGATCGTCTTGACAGTAAGTGTC 46082
Query 133644 TTTACGAAAATCTGCATG 133661
|| | |||||||||||||
Sbjct 46083 TTCATGAAAATCTGCATG 46100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483417996159360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |