Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq91 167 2e-36 >seq91 Length=177601 Score = 167 bits (184), Expect = 2e-36 Identities = 609/943 (65%), Gaps = 19/943 (2%) Strand=Plus/Plus Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCAC 147525 || ||||||||||| || || ||| |||| | |||| | || || || | ||| Sbjct 134901 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 134960 Query 147526 AGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCT 147585 || ||| || | ||| ||||| || | ||| ||||| || | |||||| ||||| Sbjct 134961 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 135020 Query 147586 TTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATA--AACCTATGCA 147643 ||| ||||||| || || || || ||| || | || | |||| | | || | Sbjct 135021 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCAT--A 135078 Query 147644 GGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACA-AC 147702 | | ||| || || ||| ||| |||||||| || || || | |||||| | | Sbjct 135079 GTTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAGAG 135138 Query 147703 CGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGC 147762 || | || |||||| || ||| ||||||||||| || || ||| ||||| | || Sbjct 135139 CGTTGAA-CTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGAGA 135197 Query 147763 GACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTAC 147822 | ||| | || | | || ||| ||| |||| || || ||||| ||||| Sbjct 135198 GTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAG 135257 Query 147823 ATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTA 147882 | | ||||| ||| | || || ||| ||| | ||| || | | | Sbjct 135258 AACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCG 135317 Query 147883 TAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCG 147939 | | ||| |||||||| || || | ||||| ||| | |||||| ||||| || Sbjct 135318 AACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCA 135377 Query 147940 CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTC 147999 ||||| ||||| | ||| | | || || || ||||| | |||||| || ||| | Sbjct 135378 CCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTG 135437 Query 148000 GCAGTGCCGTTGGTGG----AATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTT 148055 | |||||||||||| ||| | | ||| || | ||| | | ||| || Sbjct 135438 GAGGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAAT--GGGCA--TT 135493 Query 148056 AACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGA 148114 | ||||| || || || || ||| || || || ||| | || || | Sbjct 135494 GAGACCAATACCTCCAGCTGT-CTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATA 135552 Query 148115 TGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCC 148174 | || ||||||||||| | ||| | | ||| ||| ||||| || ||| ||| || Sbjct 135553 TTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAG 135612 Query 148175 GCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGC 148234 | ||||| || |||||||||||| ||||| ||||| | || || ||| | Sbjct 135613 GGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGAT 135672 Query 148235 GATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGA 148294 |||||||| || || | ||| || ||||||| |||||| |||| || || ||||| | Sbjct 135673 TGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACACGCATAA 135732 Query 148295 GCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGA 148354 ||||||| || || ||||| |||||||||||| |||||||| || ||| | || | Sbjct 135733 GCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCCA 135792 Query 148355 GGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397 | || ||| ||||||| || | ||| | || ||| | ||||| Sbjct 135793 GCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTA 135835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608435655040