Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 2e-16
seq91 82.4 6e-11
>seq1
Length=1383374
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || ||||||||| || | |||| |||||||||| || || |||
Sbjct 701556 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCCG 701497
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || || ||||| || ||||| || | ||||| || || ||||||| |||
Sbjct 701496 GCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGATTTG 701437
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | ||||| ||| || || || || || || | ||||| || || ||
Sbjct 701436 ACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTC 701377
Query 27231 TTCACAAAGATTTGCATAGCTGC 27253
||||| ||||||||||| || ||
Sbjct 701376 TTCACGAAGATTTGCATGGCGGC 701354
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079
||| || |||| | || ||||| || ||||| || || || || |||||||||||
Sbjct 702043 GCCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCT 701984
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| | ||| |||| || | ||| || || ||| |||| || ||||| || ||||| ||
Sbjct 701983 GAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGG 701924
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||| || || |||||| || | | | || | ||||||| | || ||
Sbjct 701923 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCAC 701864
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || | ||||| || || || || || ||||||||||||
Sbjct 701863 CTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCATA 701815
>seq91
Length=177601
Score = 82.4 bits (90), Expect = 6e-11
Identities = 153/223 (69%), Gaps = 9/223 (4%)
Strand=Plus/Plus
Query 130763 TGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGAT 130822
|| || ||||| || ||||| || | | ||| || || ||| ||||||| ||| ||
Sbjct 134337 TGGAACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACGGTTCGAAGCAT 134396
Query 130823 TCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAA 130882
||||||||||||| ||||| | || | || ||||||||| || || | |||||
Sbjct 134397 TCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAG 134456
Query 130883 TTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATA---GAGAG 130939
|| |||| ||| || | | || | ||||| | ||||||||||| | |||
Sbjct 134457 TTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGTCCCAATCCCACAAGTCTGAG 134516
Query 130940 GTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTT 130982
| || ||||| |||||||| || |||| || |||||||
Sbjct 134517 GGAG---TGACA---TTCCACATGTCGTATTGAAGAATGCCTT 134553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424931996995968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |