Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 seq91 82.4 6e-11 >seq1 Length=1383374 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | |||| |||||||||| || || ||| Sbjct 701556 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCCG 701497 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || ||||| || ||||| || | ||||| || || ||||||| ||| Sbjct 701496 GCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGATTTG 701437 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| ||| || || || || || || | ||||| || || || Sbjct 701436 ACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTC 701377 Query 27231 TTCACAAAGATTTGCATAGCTGC 27253 ||||| ||||||||||| || || Sbjct 701376 TTCACGAAGATTTGCATGGCGGC 701354 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| | || ||||| || ||||| || || || || ||||||||||| Sbjct 702043 GCCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCT 701984 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | ||| |||| || | ||| || || ||| |||| || ||||| || ||||| || Sbjct 701983 GAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGG 701924 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || |||||| || | | | || | ||||||| | || || Sbjct 701923 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCAC 701864 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| || || || || || |||||||||||| Sbjct 701863 CTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCATA 701815 >seq91 Length=177601 Score = 82.4 bits (90), Expect = 6e-11 Identities = 153/223 (69%), Gaps = 9/223 (4%) Strand=Plus/Plus Query 130763 TGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGAT 130822 || || ||||| || ||||| || | | ||| || || ||| ||||||| ||| || Sbjct 134337 TGGAACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACGGTTCGAAGCAT 134396 Query 130823 TCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAA 130882 ||||||||||||| ||||| | || | || ||||||||| || || | ||||| Sbjct 134397 TCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAG 134456 Query 130883 TTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATA---GAGAG 130939 || |||| ||| || | | || | ||||| | ||||||||||| | ||| Sbjct 134457 TTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGTCCCAATCCCACAAGTCTGAG 134516 Query 130940 GTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTT 130982 | || ||||| |||||||| || |||| || ||||||| Sbjct 134517 GGAG---TGACA---TTCCACATGTCGTATTGAAGAATGCCTT 134553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931996995968