Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq12 358 2e-93 seq145 183 9e-41 >seq12 Length=458364 Score = 358 bits (396), Expect = 2e-93 Identities = 958/1454 (66%), Gaps = 24/1454 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||| ||||||| || || || ||||| | || | | | |||| || Sbjct 94861 GCCATTGGTATCGATCTAGGTACAACCTACTCGTGTGTAGGCGTCTTCCGAGATGACCGC 94920 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | || || ||||| || || || || ||| |||| || || || | |||||| || ||| Sbjct 94921 ATCGAGATTATTGCCAACGACCAGGGCAACCGAACCACTCCCTCGTTCGTTGCTTTCACC 94980 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| ||||||||||| | ||||| || |||| || || || | || Sbjct 94981 GACACAGAGCGTCTGATTGGTGATGCCGCAAAGAACCAAGTCGCGATGAACCCTCACAAC 95040 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTC--TGACAAA-TCTACACA 349434 || || ||||| || |||||||| |||||| | || || | || | || || || Sbjct 95041 ACCGTCTTTGACGCCAAGCGACTGATTGGTCGGAAATTCAGCGATGCCGAAGTC----CA 95096 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 | | || | || || || || || | || || | ||| |||| || ||| | || Sbjct 95097 AGCCGACATGAAGCACTTCCCCTTCAAGGTCATTG-ACAAG--GGTGGCAAGCCAGTCAT 95153 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 |||| || | ||||||||| | || || || ||||||||| || || || ||||| Sbjct 95154 CCAGGTGGAGTTCAAAGGTGAAGAGAAGCAGTTCACACCCGAAGAGATCTCCTCCATGGT 95213 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 || || |||| || | ||| || |||| | |||| ||||| | | || || Sbjct 95214 CTTGACCAAGATGAGAGAGACTGCGGAGTCATACCTCGGTGGCACAGTCAACAACGCAGT 95273 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 |||||||| || ||||| || || || | ||||| || || || |||||||| Sbjct 95274 CATTACTGTCCCTGCCTACTTCAACGACTCTCAGCGCCAAGCTACCAAGGATGCTGGTCT 95333 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 || || || | || || || | || || || |||||||||||||| || ||||| || Sbjct 95334 GATCGCAGGCCTCAACGTCCTCCGTATCATCAACGAACCCACTGCTGCCGCCATTGCCTA 95393 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | | ||| || ||| | || || || ||| | |||||||| Sbjct 95394 CGGTCTCGACAAGAAGGCTGAGGGTGAGCGCAATGTCCTCATCTTCGATCTTGGTGGTGG 95453 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||| ||||| || || | || |||| ||||| || || ||||| || | ||||| Sbjct 95454 TACTTTCGATGTTTCTCTCTTGACCATTGAGGAGGGTATCTTCGAAGTCAAGTCCACTGC 95513 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 || || || || | ||||| ||||| || || || ||||| || || || ||||| Sbjct 95514 CGGCGACACTCACTTGGGTGGTGAAGACTTCGACAACCGTCTTGTCAACCACTTCGTTAA 95573 Query 349915 AGAATTTAAGCGTCAAGCTAAAATTG---ATATTGGAG--ATAATCCTAGAGCAATGCGT 349969 ||||| || || ||||| || | | | | ||| ||| || | || ||||| Sbjct 95574 CGAATTCAAACG-CAAGC----ATCGGAAAGACTTGAGCAGCAATGCTCGGGCTCTGCGT 95628 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 || || ||||||| ||||| ||||| ||||| || | || || || | || |||||| Sbjct 95629 CGTCTCCGAACTGCCTGTGAGCGTGCCAAGCGCACCCTGTCCTCGTCTGCACAGACCTCT 95688 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 || ||||| ||||| || || |||| || |||| | || || || || || || Sbjct 95689 ATCGAAATCGATTCCCTCTACGAAGGCATCGACTTCTACACCTCGATCACCCGAGCCCGT 95748 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 || ||||| | || |||||| || || | || ||||| |||||||| || | Sbjct 95749 TTCGAAGAGCTCTGCCAGGATCTCTTCCGATCTACTATGGAGCCTGTGGAGCGTGTCCTG 95808 Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 ||||| || || ||| | || | ||| | || || || |||||||| || Sbjct 95809 CGTGATGCCAAGATCGACAAGTCTTCCGTTCACGAAATCGTCTTGGTCGGTGGTTCCACC 95868 Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGA 350269 ||||| || | | | || || | | || || || || || ||||| || || | | Sbjct 95869 CGTATCCCCAGAATCCAGAAGCTTGTTTCCGACTTCTTCAACGGCAAGGAGCCCAACAAA 95928 Query 350270 TCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCT 350329 ||||| || || ||||| || || || || |||||||| || || || |||| | ||| Sbjct 95929 TCAATCAACCCCGATGAGGCCGTCGCCTACGGTGCTGCCGTCCAAGCCGCTATCCTGTCT 95988 Query 350330 GGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386 || | | || || | | || | || || | ||||| | ||||| || Sbjct 95989 GGTGACACCTCGTCCAAGTCGACCAACGAGATCTTGCTCTTGGATGTCGCGCCACTGTCC 96048 Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTA 350446 || || | || ||| |||||| || |||||| ||| || | || | || | Sbjct 96049 CTCGGTATCGAGACTGCTGGTGGTGTCATGACTCCTCTCATCAAGCGCAACACCACCATC 96108 Query 350447 CCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATT 350506 || || || |||||| | || || || || || | || || ||||| | || ||| Sbjct 96109 CCCACCAAGAAGTCCGAGACCTTCTCCACCTTCTCTGACAACCAGCCTGGTGTGCTTATT 96168 Query 350507 CAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACC 350566 ||||| | || ||||| ||||||||||| || || || || ||||| | || Sbjct 96169 CAAGTCTACGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTTGGCAAGTTCGAA 96228 Query 350567 CTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATT 350626 || | ||||| || || | || ||||| ||||| || ||| | |||||| || Sbjct 96229 CTTTCCGGTATTCCCCCTGCTCCCCGTGGTGTTCCCCAGATCGAGGTCACATTCGATCTT 96288 Query 350627 GATTCAAATGGTAT 350640 ||| | || || || Sbjct 96289 GATGCCAACGGAAT 96302 >seq145 Length=87328 Score = 183 bits (202), Expect = 9e-41 Identities = 734/1140 (64%), Gaps = 53/1140 (5%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||||||||| || | |||||| ||| || ||||||||| |||| || ||||| | Sbjct 22693 CCCGAAGAAATCTCCGCCATGGTTCTAGGCAAGATGAAGGAAGTTGCGGAGGCATACCTG 22634 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | ||| || | || ||| | || || || || || || || || || ||||| Sbjct 22633 GGCAAGAAAGTTACCCACGCAGTTGTCACGGTCCCGGCATACTTCAACGACGCTCAGCGA 22574 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || ||||||||||| | || || || || | |||||| | | | || || Sbjct 22573 CAAGCTACCAAAGATGCTGGTACTATCGCTGGTTTGACTGTTCTGCGTGTTGTGAACGAG 22514 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || ||||| ||||| || || ||||| || || || || | | |||| | | || Sbjct 22513 CCAACTGCCGCAGCTATCGCCTATGGCCTGGACAA---GAAGGGCAAAGAGAGCCAGATC 22457 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || | | ||| | ||||||||||| || ||||| || || || || ||||||| || Sbjct 22456 ATTGTCTACGATCTTGGTGGTGGTACATTCGATGTTTCCCTTCTTTCAATTGAAGATGGC 22397 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 |||| || || || || || ||||| || ||||||||||| ||||| || || | Sbjct 22396 GTTTTCGAGGTCCTGGCCACCGCCGGTGACACTCATCTTGGTGGCGAAGACTTCGACCAA 22337 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAA----ATTGATATTGG 349947 || | || | ||||| || ||| || |||| || | ||||| | Sbjct 22336 CGAGTGATTGACTACTTTGTGAAGAAATACAA----CAAGGAGAACGATGTCGATATCCG 22281 Query 349948 AGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTG----TGAACGTGCTAAGCGTT 350003 | ||| | | ||| || || ||| ||||| ||||| || ||||| Sbjct 22280 CAAGGATCTGAAGACCATGGGTAAGCT--GAA--GCGTGAGGTGGAACGCGCCAAGCGAA 22225 Query 350004 CCTTATCATCTACTACCCAAACCTCT------ATTGAAATTGATTCTCTTGCTGATGGCA 350057 || | || | |||||| ||| || ||||| || || | | || | Sbjct 22224 CCCTTTCCT------CCCAAATGTCTACACGAATCGAAATCGAAGCTTTCCACAACGGAA 22171 Query 350058 AAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTA 350117 | || |||| | || | || || ||| ||| || || || ||||| ||| || Sbjct 22170 AGGACTTCTCTGAGACTTTGACCCGGGCTAAGTTCGAGGAGTTGAACATGGA-CTTGTTC 22112 Query 350118 GAGCA-ACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATC-- 350174 || | || | | || || ||| | ||||| || ||||| || ||| | ||||| Sbjct 22111 AAGAAGACGCTTAAGCCGGTCGAACAGGTATTGAAGGATGC--CAAGGTCAAGAAATCCG 22054 Query 350175 AGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTAC 350234 ||||||| || | || | |||||||||| || |||||||| || ||| |||| | Sbjct 22053 AGATTGACGACATTGTCCTGATTGGTGGTTCGACTCGTATTCCCAAGGTT---CAGTCAA 21997 Query 350235 T-ATC--TGAGTTTTTTAATGGCAA-AGAACCTTCTAGATCAATTAATCCAGATGAAGCT 350290 | ||| || || ||| |||||| | | || | || | || || || || || ||| Sbjct 21996 TGATCGAGGAATTCTTTGGTGGCAAGAAAGCCAGCAAGGGC-ATCAACCCTGACGAGGCT 21938 Query 350291 GTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATT 350350 || |||||||| || || ||||||| | || | ||||| | | | || Sbjct 21937 GTCGCATATGGCGCAGCCGTTCAGGGTGGTGTTCTCTCTGGCGAAA------CCGGAACC 21884 Query 350351 GATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAA 350410 || || || | || | ||||| | ||| || | || || | |||||| | |||| | Sbjct 21883 GAAGACCTTATTCTCATGGATGTCAATCCTCTGACTCTCGGCATTGAAACTACCGGTGGA 21824 Query 350411 GTAATGACTGTTCTTATTCCTAGAAATAGTACT-GTACCTACAAAAAAGTCCCAAACTTT 350469 || ||||| || ||||| |||| | ||| ||||| || || || ||||||| || Sbjct 21823 GTCATGACCAAACTCATTCCCCGAAACA-CACTGGTACCGACCAAGAAATCCCAAATCTT 21765 Query 350470 TTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGC 350529 ||||| ||| ||||| || || | ||| || || || |||||||| ||||| || Sbjct 21764 CTCTACGGCTGCGGATAACCAACCCGTAGTACTGATCCAGGTTTTTGAAGGCGAACGAGC 21705 Query 350530 TCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCC 350589 || || || || || || || |||| || | | ||||| || || Sbjct 21704 AATGACCAAGGACAACAACCTTCTGGGCAAATTCGAACTGACCGGTATTCCTCCCGCCCC 21645 Query 350590 TAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGT 350649 | | || ||||||||||||||||| |||||||| | || |||| |||||| | || || Sbjct 21644 TCGTGGTGTTCCTCAGATTGAAGTGTCTTTCGAACTCGACGCAAACGGTATTCTCAAGGT 21585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515245391812592