Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq91 181 1e-40
seq26 140 4e-28
seq2 82.4 8e-11
>seq91
Length=177601
Score = 181 bits (200), Expect = 1e-40
Identities = 462/698 (66%), Gaps = 4/698 (1%)
Strand=Plus/Minus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
||||||||| | | ||| ||| |||| |||||| ||||| |||| ||||| ||||||
Sbjct 135682 GAGACGTACAATCTCATGTCCCAGAAGTGCTTTACCCACGCTTCGCCCACCCTTTTCAAC 135623
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
|| || || ||| ||||| |||| ||| ||| || | | ||||| || |||
Sbjct 135622 GCCGGAACCCCTCAACCTCAACTGTCCTCCTGTTTCTTGATTGACATGAAAGAAGACAGC 135563
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
||||| || || || || || |||||| |||||| ||||||||| | || |||
Sbjct 135562 ATCGAGGGAATATATGACACCCTCAAGACTTGTGCCATGATCTCCAAGACAGCTGGAGGT 135503
Query 53423 ATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481
|| ||| || | ||| | | | ||||| | || | || || || |||||
Sbjct 135502 ATTGGTCTCAA-TGCCCATTGCATTCGTGCCACAGGATCCTACATTGCAGGCACCAACGG 135444
Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541
| | || | || | | || ||||| ||||||||||| || || || || |||||| |
Sbjct 135443 CACCTCCAACGGGCTTATCCCCATGCTTCGCGTCTTCAATAATACTGCTCGCTACGTCGA 135384
Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601
|||||||| |||||| || | || ||||||||||||||||| |||||||| ||
Sbjct 135383 TCAGGGTGGCAATAAGCGCCCAGGTGCTTTTGCCATCTACCTCGAGCCATGGCACGCAGA 135324
Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGA 53661
| | | || ||| | | ||| | ||| || || | |||||| | | || ||
Sbjct 135323 CGTGTTCGACTTTTTGAACCTGAGAAAGAACCACGGCAAGGAAGAGGTTAGAGCACGCGA 135264
Query 53662 CCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720
| |||| ||| || |||||| ||| ||| | |||||| || || |||||| || | |
Sbjct 135263 CTTGTTCTAC-GCCATGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGAAGAACCAAG 135205
Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780
| ||| || | || || | ||| || ||||| | ||||| ||||| ||||
Sbjct 135204 AATGGACTCTCTTCTGTCCTCATGAGGCACCTGGCCTTGCCGACGTCTATGGTGACGAGT 135145
Query 53781 TTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGC 53840
| |||| | || || || | ||||||| ||| || ||||| |
Sbjct 135144 TCAACGCTCTATACGAGAGATATGAGAAGGAGGGCCGTGGTCGCCAGACTGTAAAGGCTC 135085
Query 53841 GTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCT 53900
| ||||| |||| |||||| || ||| || || || ||||| || ||| ||
Sbjct 135084 AGAAACTATGGTATGCTATCCTCGAGGCACAGACCGAAACTGGGACGCCCTATATGCTCT 135025
Query 53901 ACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
||||||| | ||| ||||||||||||||||||
Sbjct 135024 ACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAAC 134987
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/140 (74%), Gaps = 6/140 (4%)
Strand=Plus/Minus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
|| || |||||||| | ||| ||||||||||||||||| |||||| | || | | ||
Sbjct 134155 GCGGACCGTGGTGCCTTCATTGACCAGTCCCAGTCTCTCAACATCCACTTGAAAGAACCA 134096
Query 55847 TCACTGGCCAAGTT---GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903
| ||| |||| | |||| ||||||||| || ||||| | ||| ||||||||
Sbjct 134095 ACCATGGGCAAGATCACGAGC---ATGCACTTTGCAGGCTGGAAAATGGGTCTCAAGACC 134039
Query 55904 GGTATGTACTATCTGCGGAC 55923
|| |||||||| ||||| ||
Sbjct 134038 GGCATGTACTACCTGCGCAC 134019
>seq26
Length=352299
Score = 140 bits (154), Expect = 4e-28
Identities = 215/304 (71%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 117298 TAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACC 117357
||| || ||||||||||| |||| |||||||| ||| |||| || || |||||
Sbjct 282644 TAGACGGGTGAAAATGTATCGAGCGCTTGCAGAATCGCTGCCGCCCTGGTTTCGGGTACC 282585
Query 117358 GAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAA 117417
||||| || |||||||| | ||| | ||||| | || |||||| |||| ||||
Sbjct 282584 AAATTGGCCTGAGGGCTCCAACAAGTTGACATTGTTCGATCCGACAAAGCTTTGGGCCAG 282525
Query 117418 GTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCAC 117477
| ||||||||| ||||| | ||||||||||||||||| ||| | | ||
Sbjct 282524 GCCGACAATCGTCTGCTGGAGAGATGTTTCACCATGGTGATACGCGGTCATACCACCGAC 282465
Query 117478 GTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATA 117537
| |||||||||| || |||||||| || |||| || ||||| ||| |||||
Sbjct 282464 CAAACCCGCCAGCTCGGCAACCTTCATATCCTTTTTCAGATTGCGCTTGAAGCATGCATA 282405
Query 117538 AATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGA-GGGATCGAACGCTTGA 117596
|| || || ||||||| ||||| |||||||| | || ||| ||||| || || ||
Sbjct 282404 CATGACTTTTCGCTGACCAGGCTTTAGACCATCAACTAC-TGAGGGGATAGATCGGATGT 282346
Query 117597 TGTC 117600
||||
Sbjct 282345 TGTC 282342
Score = 86.0 bits (94), Expect = 7e-12
Identities = 189/282 (67%), Gaps = 1/282 (0%)
Strand=Plus/Minus
Query 152025 ACGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAA 152084
||| ||||| |||||||| | ||| || | ||| |||| || || || |||||
Sbjct 282641 ACGGGTGAAAATGTATCGAGCGCTTGCAGAATCGCTGCCGCCCTGGTTTCGGGTACCAAA 282582
Query 152085 CTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144
|| || |||||||| | | ||||| ||||| | || || || | || ||||
Sbjct 282581 TTGGCCTGAGGGCTCCAACAAGTTGACATTGTTCGATCCGACAAAGCTTTGGGCCAGGCC 282522
Query 152145 CACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTA 152204
|||||||| ||| ||| | |||||| ||||||||||| ||| | ||| |
Sbjct 282521 GACAATCGTCTGCTGGAGAGATGTTTCACCATGGTGATACGCGGTCATACCACCGACCAA 282462
Query 152205 TCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAAT 152264
||||||| || || |||||||| ||| | |||| || ||||| || || || ||
Sbjct 282461 ACCCGCCAGCTCGGCAACCTTCATATCCTTTTTCAGATTGCGCTTGAAGCATGCATACAT 282402
Query 152265 CACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGG 152306
|| || ||||| || || | ||| || || || |||||
Sbjct 282401 GACTTTTCGCTGACCAGGCTTTAGACCATCAACTAC-TGAGG 282361
>seq2
Length=1089760
Score = 82.4 bits (90), Expect = 8e-11
Identities = 173/255 (68%), Gaps = 5/255 (2%)
Strand=Plus/Plus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
||||| ||||| ||||| |||||| ||| ||||||| ||||| ||| ||||
Sbjct 279904 AGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAG 279963
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA---CGGTGCATCGGAA 74921
|||||||||||||| || || || || || ||||| || || || | | |
Sbjct 279964 AAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCT 280023
Query 74922 GTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGC-AGGGACAGTATCGATCGC 74980
| ||||| | ||||||| || || |||| | || || ||||| || ||||| ||
Sbjct 280024 GATATCCATCGCAGAGCCCAGTCTGC-TTTCTTGCGAATGCAAGGGATTGTGTCGATGGC 280082
Query 74981 TTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTA 75040
| ||| || || |||||||| ||| ||||| || ||||||| | ||| |||
Sbjct 280083 GTCGAACAGATATGTCTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAGGCTGTA 280142
Query 75041 CGTCTCCGAATGAAT 75055
| | ||||| || ||
Sbjct 280143 CATTTCCGAGTGGAT 280157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547212826147200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |