Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq91 197 2e-45 seq1 152 6e-32 seq51 111 2e-19 seq112 107 2e-18 seq26 104 3e-17 seq17 98.7 1e-15 >seq91 Length=177601 Score = 197 bits (218), Expect = 2e-45 Identities = 679/1051 (65%), Gaps = 37/1051 (4%) Strand=Plus/Plus Query 80723 CGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-CTCG 80781 |||| || || || ||||| |||| ||| || ||||| || ||| | || || Sbjct 134710 CGTCGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGAAGTT-GCTCTTCTTC 134768 Query 80782 GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACC 80841 || || || | ||||| |||| ||||||| | ||| |||||||| || |||||| Sbjct 134769 GCTTCAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTAGGTTGCGAGTCACAACC 134828 Query 80842 CGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT---------TC-ACAAA 80891 | || || |||||||| ||||| ||| | ||| || || || Sbjct 134829 TGAGTGACCTCATGAAGACGACCGAAGTCATATT----CACCTCGAGCTTGGTCGACGAA 134884 Query 80892 TGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951 || ||| || |||||| |||||||||||||| || ||||| || | | | || | || Sbjct 134885 TGTCGGGAGAGCCAGGGAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTC 134944 Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTA--ATTGTACCCAGGTTTTTCTGGTTTGAC 81009 ||| || || ||||| | ||| || ||| || || |||| ||| |||||||| | Sbjct 134945 GACAATCTCAGTGCAAAGATTGGAG--CTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTC 135002 Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069 || ||||| |||||||||||| ||| || || || || || ||| ||||| || | Sbjct 135003 TTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCG 135062 Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129 ||||| || | ||| | | | ||||| || || ||| ||| || | || Sbjct 135063 AGGATAGCATACCATAGTTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCTTCTCA 135122 Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189 || | |||| ||| ||||| | |||| | | || | ||| | || ||| Sbjct 135123 TATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCA 135182 Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249 | ||| || | || ||| || || ||||| ||| | |||||| |||||| Sbjct 135183 TGAGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGA 135242 Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGC 81309 |||| | |||| ||||| |||||| | |||| || | || ||||| | | Sbjct 135243 GTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTC 135302 Query 81310 AACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCC 81369 | | | |||||| | | ||| || ||||||||||| || || | ||| | | || Sbjct 135303 AGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCT 135362 Query 81370 TTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426 ||| | ||||||||| | |||||| || ||||| || || || || | ||| Sbjct 135363 GGGCGCTTATTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATG 135422 Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA-- 81484 ||||| | || | || ||||| || || | || || || |||| || | Sbjct 135423 GGGATAAGCCCGTTGGAGGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATG 135482 Query 81485 CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCA 81544 | || ||||| |||| || || || | ||| || ||| ||||| || | Sbjct 135483 CAATGGGCATTGA--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGA 135540 Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604 ||| ||||| |||||||||||||| |||| ||||||||||| |||||||||| |||| Sbjct 135541 GGGTGTCATATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACA 135600 Query 81605 TCTGAGGGCTTTTTGAG-----CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659 ||||| ||||| ||||| ||||| || || || | ||||| | || | Sbjct 135601 GTTGAGG-----TTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCA 135655 Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719 | ||||| || | || || || || | | ||||||||| | ||||||||| Sbjct 135656 CTTCTGGGACATGAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACC 135715 Query 81720 GATAGCTACACGCATAAACATGTACTGGGGC 81750 | || |||||||||| ||||| |||||| Sbjct 135716 CACTGCCACACGCATAAGCATGTGTTGGGGC 135746 >seq1 Length=1383374 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 701360 ATGCAAATCTTCGTGAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 701419 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | || | || || |||||||||||||| || || || |||||| Sbjct 701420 GACACGATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 701479 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||||||||| || | || ||||| | ||||| || Sbjct 701480 CAGCGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTGTCCGACTACAAC 701539 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | ||||| || || || Sbjct 701540 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTCCGTCTCCGTGGCGG 701586 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| ||||| |||||||| || || || |||||||| || | Sbjct 701588 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATCACGCTGGAGGTTGAATCGAGC 701647 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| || || ||||||||||| || || || || |||||| Sbjct 701648 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGGATCCCGCCCGACCAG 701707 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| || ||||| | || || || | ||||| || Sbjct 701708 CAGCGCCTGATCTTTGCAGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAAC 701767 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || || ||||| || | || || ||||| || Sbjct 701768 ATCCAGAAGGAATCGACGCTCCATCTCGTGCTCCGGCTCCGCGGCGG 701814 Score = 125 bits (138), Expect = 8e-24 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| ||||| |||||||| ||||| || ||||| ||| || | Sbjct 701816 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAG--AGCT 701873 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | ||| | || || |||||||||||||| |||||||| |||| Sbjct 701874 CAGACACGATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 701933 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTAT 27582 ||||||| || ||||| || || ||||| | ||||| | || || || ||| ||||| Sbjct 701934 AGCAGCGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGC-GACTAC 701992 Query 27583 AATGTCCAAAAGGA 27596 || |||| ||||| Sbjct 701993 AACATCCAGAAGGA 702006 >seq51 Length=241757 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||| || ||||| || |||||||| || || || || || || ||||||||||| Sbjct 20372 GACAAGGAAGGCATTCCCCCGGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 20431 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || || || | ||||| || |||| |||||||| || || || || |||||| Sbjct 20432 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCGACCCTCCACCTGGTCTTG 20491 Query 27619 CGTCTTCGCGGTGG 27632 |||||||||||||| Sbjct 20492 CGTCTTCGCGGTGG 20505 >seq112 Length=144762 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || | ||||| ||||| | |||||| || || || ||||||||||| | Sbjct 46099 ATGCAGATTTTCATGAAGACACTTACTGTCAAGACGATCACGCTGGAGGTTGAGTCGAGC 46040 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || || | ||| || ||| |||||||||| || || | | |||||| Sbjct 46039 GACACAATCAACAACATCAAGAGCAAGATTTAGGACAAGGAAGGGATCACATCCGACCAG 45980 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| || ||||| | || || || | ||||| || Sbjct 45979 CAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAAC 45920 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || || ||||| || || || ||||| || Sbjct 45919 ATCCAGAAGGAATCGACGCTCCATCTCGTGCCCCGCCTCCGCGGCGG 45873 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/189 (70%), Gaps = 17/189 (9%) Strand=Plus/Minus Query 27420 CAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAA 27479 |||||| ||||| |||||||| || || |||||||| ||||| | || || Sbjct 46296 CAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGCGA----------AA 46247 Query 27480 TTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTT 27539 | | || || |||||||||||||| ||||| || || |||||||| || || || Sbjct 46246 T-------CCAAGATCCAGGACAAGGAGGGCATTCCGCCCGAACAGCAGCGCCTGATCTT 46194 Query 27540 TGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATC 27599 || || ||||||||||| |||| || ||| | ||||| || |||| ||||| || Sbjct 46193 CGCCGGCAAGCAACTCGAAGATGGCCGCACCAGGTCCGACTACAACATCCAGAAGGACTC 46134 Query 27600 CACTCTTCA 27608 || || || Sbjct 46133 GACCCTGCA 46125 >seq26 Length=352299 Score = 104 bits (114), Expect = 3e-17 Identities = 186/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 || || || |||||| ||||| || || || || || ||| ||||| || ||| Sbjct 282372 GATGGTCTAAAGCCTGGTCAGCGAAAAGTCATGTATGCATGCTTCAAGCGCAATCTGAAA 282431 Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103 | || |||||||| || ||||| |||| | || | | || || |||||||| Sbjct 282432 AAGGATATGAAGGTTGCCGAGCTGGCGGGTTTGGTCGGTGGTATGACCGCGTATCACCAT 282491 Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163 || || | || |||||| || |||||| ||| || || | ||||||||| | || Sbjct 282492 GGTGAAACATCTCTCCAGCAGACGATTGTCGGCCTGGCCCAAAGCTTTGTCGGATCGAAC 282551 Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223 || | ||||| | ||||| || || || ||||| ||||| | || |||| ||| Sbjct 282552 AATGTCAACTTGTTGGAGCCCTCAGGCCAATTTGGTACCCGAAACCAGGGCGGCAGCGAT 282611 Query 32224 GCTGCGAGCTCCCGTTACATCTTCACCCGTCT 32255 |||| ||| | || ||||| ||||||||||| Sbjct 282612 TCTGCAAGCGCTCGATACATTTTCACCCGTCT 282643 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 30327 TGGAATTCCCATTAAGAAACACCCTACCGAAAAAATCTGGATCCCCGAACTCATTTTTGG 30386 ||| ||||| || ||| ||| | | ||||| |||| ||||| || | ||||| || Sbjct 280601 TGGTATTCCTATCGAGATCCACTCGAAAGAAAAGATCTACATCCCAGAGATGATTTTCGG 280660 Query 30387 GCACCTTTTGACAAGCTCCAACTACAACGACGAGGAGCAGCGCGTGACGGGTGGACGAAA 30446 || || || || |||| || ||| ||||| | || ||| | || ||||| | || Sbjct 280661 CCATCTCTTAACCGGCTCGAATTACGACGACAACGAACAGAAGATCACAGGTGGCAGGAA 280720 Query 30447 TGGCTACGGTGCAAAGCTCGCCAACGTTTTCAGTTCCCTATTCA 30490 |||||||||||| ||||| |||||| | ||||| || ||||| Sbjct 280721 TGGCTACGGTGCGAAGCTGGCCAACATCTTCAGCACCGAATTCA 280764 >seq17 Length=408214 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || |||||||| || || |||||||| ||||| || | || Sbjct 189905 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACGAT 189964 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | ||| | || || || |||||||| || || || || ||||||||||| | Sbjct 189965 CGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGATT 190024 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || || || || |||||||| || |||| || || || ||| ||||| || |||| | Sbjct 190025 GATCTTCGCCGGCAAGCAACTTGAAGATGGCCGAACTCTGAGC-GACTACAACATCCAGA 190083 Query 27593 AGG 27595 ||| Sbjct 190084 AGG 190086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307092199680