Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq91 197 2e-45
seq1 152 6e-32
seq51 111 2e-19
seq112 107 2e-18
seq26 104 3e-17
seq17 98.7 1e-15
>seq91
Length=177601
Score = 197 bits (218), Expect = 2e-45
Identities = 679/1051 (65%), Gaps = 37/1051 (4%)
Strand=Plus/Plus
Query 80723 CGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-CTCG 80781
|||| || || || ||||| |||| ||| || ||||| || ||| | || ||
Sbjct 134710 CGTCGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGAAGTT-GCTCTTCTTC 134768
Query 80782 GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACC 80841
|| || || | ||||| |||| ||||||| | ||| |||||||| || ||||||
Sbjct 134769 GCTTCAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTAGGTTGCGAGTCACAACC 134828
Query 80842 CGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT---------TC-ACAAA 80891
| || || |||||||| ||||| ||| | ||| || || ||
Sbjct 134829 TGAGTGACCTCATGAAGACGACCGAAGTCATATT----CACCTCGAGCTTGGTCGACGAA 134884
Query 80892 TGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951
|| ||| || |||||| |||||||||||||| || ||||| || | | | || | ||
Sbjct 134885 TGTCGGGAGAGCCAGGGAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTC 134944
Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTA--ATTGTACCCAGGTTTTTCTGGTTTGAC 81009
||| || || ||||| | ||| || ||| || || |||| ||| |||||||| |
Sbjct 134945 GACAATCTCAGTGCAAAGATTGGAG--CTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTC 135002
Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069
|| ||||| |||||||||||| ||| || || || || || ||| ||||| || |
Sbjct 135003 TTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCG 135062
Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129
||||| || | ||| | | | ||||| || || ||| ||| || | ||
Sbjct 135063 AGGATAGCATACCATAGTTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCTTCTCA 135122
Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189
|| | |||| ||| ||||| | |||| | | || | ||| | || |||
Sbjct 135123 TATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCA 135182
Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249
| ||| || | || ||| || || ||||| ||| | |||||| ||||||
Sbjct 135183 TGAGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGA 135242
Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGC 81309
|||| | |||| ||||| |||||| | |||| || | || ||||| | |
Sbjct 135243 GTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTC 135302
Query 81310 AACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCC 81369
| | | |||||| | | ||| || ||||||||||| || || | ||| | | ||
Sbjct 135303 AGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCT 135362
Query 81370 TTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426
||| | ||||||||| | |||||| || ||||| || || || || | |||
Sbjct 135363 GGGCGCTTATTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATG 135422
Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA-- 81484
||||| | || | || ||||| || || | || || || |||| || |
Sbjct 135423 GGGATAAGCCCGTTGGAGGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATG 135482
Query 81485 CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCA 81544
| || ||||| |||| || || || | ||| || ||| ||||| || |
Sbjct 135483 CAATGGGCATTGA--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGA 135540
Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604
||| ||||| |||||||||||||| |||| ||||||||||| |||||||||| ||||
Sbjct 135541 GGGTGTCATATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACA 135600
Query 81605 TCTGAGGGCTTTTTGAG-----CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659
||||| ||||| ||||| ||||| || || || | ||||| | || |
Sbjct 135601 GTTGAGG-----TTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCA 135655
Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719
| ||||| || | || || || || | | ||||||||| | |||||||||
Sbjct 135656 CTTCTGGGACATGAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACC 135715
Query 81720 GATAGCTACACGCATAAACATGTACTGGGGC 81750
| || |||||||||| ||||| ||||||
Sbjct 135716 CACTGCCACACGCATAAGCATGTGTTGGGGC 135746
>seq1
Length=1383374
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| ||||| |||||||| || || |||||||| ||||| |
Sbjct 701360 ATGCAAATCTTCGTGAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 701419
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | || | || || |||||||||||||| || || || ||||||
Sbjct 701420 GACACGATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 701479
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||||||||| || | || ||||| | ||||| ||
Sbjct 701480 CAGCGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTGTCCGACTACAAC 701539
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || || ||| | ||||| || || ||
Sbjct 701540 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTCCGTCTCCGTGGCGG 701586
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| ||||| |||||||| || || || |||||||| || |
Sbjct 701588 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATCACGCTGGAGGTTGAATCGAGC 701647
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| || || ||||||||||| || || || || ||||||
Sbjct 701648 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGGATCCCGCCCGACCAG 701707
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| || ||||| | || || || | ||||| ||
Sbjct 701708 CAGCGCCTGATCTTTGCAGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAAC 701767
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| || || ||||| || | || || ||||| ||
Sbjct 701768 ATCCAGAAGGAATCGACGCTCCATCTCGTGCTCCGGCTCCGCGGCGG 701814
Score = 125 bits (138), Expect = 8e-24
Identities = 147/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| ||||| |||||||| ||||| || ||||| ||| || |
Sbjct 701816 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAG--AGCT 701873
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | || | || | ||| | || || |||||||||||||| |||||||| ||||
Sbjct 701874 CAGACACGATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 701933
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTAT 27582
||||||| || ||||| || || ||||| | ||||| | || || || ||| |||||
Sbjct 701934 AGCAGCGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGC-GACTAC 701992
Query 27583 AATGTCCAAAAGGA 27596
|| |||| |||||
Sbjct 701993 AACATCCAGAAGGA 702006
>seq51
Length=241757
Score = 111 bits (122), Expect = 2e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
|||||||| || ||||| || |||||||| || || || || || || |||||||||||
Sbjct 20372 GACAAGGAAGGCATTCCCCCGGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 20431
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | || || || | ||||| || |||| |||||||| || || || || ||||||
Sbjct 20432 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCGACCCTCCACCTGGTCTTG 20491
Query 27619 CGTCTTCGCGGTGG 27632
||||||||||||||
Sbjct 20492 CGTCTTCGCGGTGG 20505
>seq112
Length=144762
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || | ||||| ||||| | |||||| || || || ||||||||||| |
Sbjct 46099 ATGCAGATTTTCATGAAGACACTTACTGTCAAGACGATCACGCTGGAGGTTGAGTCGAGC 46040
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || || | ||| || ||| |||||||||| || || | | ||||||
Sbjct 46039 GACACAATCAACAACATCAAGAGCAAGATTTAGGACAAGGAAGGGATCACATCCGACCAG 45980
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| || ||||| | || || || | ||||| ||
Sbjct 45979 CAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAAC 45920
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| || || ||||| || || || ||||| ||
Sbjct 45919 ATCCAGAAGGAATCGACGCTCCATCTCGTGCCCCGCCTCCGCGGCGG 45873
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/189 (70%), Gaps = 17/189 (9%)
Strand=Plus/Minus
Query 27420 CAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAA 27479
|||||| ||||| |||||||| || || |||||||| ||||| | || ||
Sbjct 46296 CAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGCGA----------AA 46247
Query 27480 TTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTT 27539
| | || || |||||||||||||| ||||| || || |||||||| || || ||
Sbjct 46246 T-------CCAAGATCCAGGACAAGGAGGGCATTCCGCCCGAACAGCAGCGCCTGATCTT 46194
Query 27540 TGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATC 27599
|| || ||||||||||| |||| || ||| | ||||| || |||| ||||| ||
Sbjct 46193 CGCCGGCAAGCAACTCGAAGATGGCCGCACCAGGTCCGACTACAACATCCAGAAGGACTC 46134
Query 27600 CACTCTTCA 27608
|| || ||
Sbjct 46133 GACCCTGCA 46125
>seq26
Length=352299
Score = 104 bits (114), Expect = 3e-17
Identities = 186/272 (68%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043
|| || || |||||| ||||| || || || || || ||| ||||| || |||
Sbjct 282372 GATGGTCTAAAGCCTGGTCAGCGAAAAGTCATGTATGCATGCTTCAAGCGCAATCTGAAA 282431
Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103
| || |||||||| || ||||| |||| | || | | || || ||||||||
Sbjct 282432 AAGGATATGAAGGTTGCCGAGCTGGCGGGTTTGGTCGGTGGTATGACCGCGTATCACCAT 282491
Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163
|| || | || |||||| || |||||| ||| || || | ||||||||| | ||
Sbjct 282492 GGTGAAACATCTCTCCAGCAGACGATTGTCGGCCTGGCCCAAAGCTTTGTCGGATCGAAC 282551
Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223
|| | ||||| | ||||| || || || ||||| ||||| | || |||| |||
Sbjct 282552 AATGTCAACTTGTTGGAGCCCTCAGGCCAATTTGGTACCCGAAACCAGGGCGGCAGCGAT 282611
Query 32224 GCTGCGAGCTCCCGTTACATCTTCACCCGTCT 32255
|||| ||| | || ||||| |||||||||||
Sbjct 282612 TCTGCAAGCGCTCGATACATTTTCACCCGTCT 282643
Score = 84.2 bits (92), Expect = 2e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 30327 TGGAATTCCCATTAAGAAACACCCTACCGAAAAAATCTGGATCCCCGAACTCATTTTTGG 30386
||| ||||| || ||| ||| | | ||||| |||| ||||| || | ||||| ||
Sbjct 280601 TGGTATTCCTATCGAGATCCACTCGAAAGAAAAGATCTACATCCCAGAGATGATTTTCGG 280660
Query 30387 GCACCTTTTGACAAGCTCCAACTACAACGACGAGGAGCAGCGCGTGACGGGTGGACGAAA 30446
|| || || || |||| || ||| ||||| | || ||| | || ||||| | ||
Sbjct 280661 CCATCTCTTAACCGGCTCGAATTACGACGACAACGAACAGAAGATCACAGGTGGCAGGAA 280720
Query 30447 TGGCTACGGTGCAAAGCTCGCCAACGTTTTCAGTTCCCTATTCA 30490
|||||||||||| ||||| |||||| | ||||| || |||||
Sbjct 280721 TGGCTACGGTGCGAAGCTGGCCAACATCTTCAGCACCGAATTCA 280764
>seq17
Length=408214
Score = 98.7 bits (108), Expect = 1e-15
Identities = 133/183 (73%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || |||||||| || || |||||||| ||||| || | ||
Sbjct 189905 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACGAT 189964
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| || | ||| | || || || |||||||| || || || || ||||||||||| |
Sbjct 189965 CGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGATT 190024
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592
|| || || || |||||||| || |||| || || || ||| ||||| || |||| |
Sbjct 190025 GATCTTCGCCGGCAAGCAACTTGAAGATGGCCGAACTCTGAGC-GACTACAACATCCAGA 190083
Query 27593 AGG 27595
|||
Sbjct 190084 AGG 190086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570307092199680
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