Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq66 127 2e-24 >seq66 Length=213812 Score = 127 bits (140), Expect = 2e-24 Identities = 226/325 (70%), Gaps = 6/325 (2%) Strand=Plus/Minus Query 30137 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC-CACGGCGTTTTGCAGCTGATC 30195 ||||| |||||||| | ||| ||| || ||| | || ||| | | || | ||| || Sbjct 202425 ATGATCCGCCTGTCGTATGGATTGGTCTTGA-GTTTTCGCACCACCTCTTTGATCTGGTC 202367 Query 30196 CACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCA 30255 ||| || | |||| |||||||| |||| ||||||||||||||||||| | ||| Sbjct 202366 CACTCCTTTGCCCGTGTAGTCTGTATGGCAGTCCTTGTACTCTGCTCCGAAATGGCGCCA 202307 Query 30256 CTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTC 30315 || || ||||| || || || || ||||| || || | || |||| ||| |||||| Sbjct 202306 TTGAAATCCGTAGACAGGGCCGAGATCTCCTTCCTCGCGGTCAACGAATCCCAACTTGTC 202247 Query 30316 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT--TTACCCCCTTCTCAGAGAGCTCT 30373 | || |||| || ||||| |||||||||| | | || ||||| |||||| Sbjct 202246 GAGGAATTCTCGCGAGCCGTTCCCGTCCCAGATGTGGATGCCTGCTTCTGAGAGAG--GC 202189 Query 30374 TTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 30433 || || | ||| | ||| ||||||||||||||||| |||||| |||| Sbjct 202188 TTCGATGTCGTGCAGCCTGATACGAACCACAGCAGCTCGGTGGTGACGGCTCGTAGAAAG 202129 Query 30434 ACCCTCTTGGTCGTGAGGAGGGGAA 30458 || | || || ||||||||||||| Sbjct 202128 ACGCGTTTAGTGGTGAGGAGGGGAA 202104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308102314688