Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 3e-32
seq17 120 7e-22
seq112 109 1e-18
seq46 100 7e-16
seq51 96.9 8e-15
>seq1
Length=1383374
Score = 154 bits (170), Expect = 3e-32
Identities = 164/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || || || || || || || |||||||| || |||| || || | || ||
Sbjct 701799 AGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCC 701740
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||||||||| ||||| ||||| || ||||| || || | ||||||||||||
Sbjct 701739 TCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCC 701680
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079
|||||||| || ||||| ||||| ||||| ||| ||||||||| || ||||||
Sbjct 701679 TGGATCTTGCTCTTGACGTTGTCGATCGTGTC---GCTCGATTCAACCTCCAGCGTGATC 701623
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || |||||||| || | |||||
Sbjct 701622 GTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701588
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| ||||| || || | ||| | ||| ||| || |||||||| || || || ||
Sbjct 702037 ACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGT 701978
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| || || |||| ||||||||| ||||| || || || || ||||| ||||||| ||
Sbjct 701977 CCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCC 701918
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || ||||| ||||| ||||| ||||| || ||||| ||
Sbjct 701917 CTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAG 701858
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| || || || |||||||| || | |||||
Sbjct 701857 CGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| || |||||||| || || | ||||| | || |||
Sbjct 701571 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 701512
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| |||||||| ||||| || ||||| || || | || |||||||||
Sbjct 701511 TCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 701452
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| || || ||||| ||||| | || ||||| || ||||| |||
Sbjct 701451 TGGATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTC 701392
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | |||||
Sbjct 701391 TTGCCAGTAAGTGTCTTCACGAAGATTTGCAT 701360
>seq17
Length=408214
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || || || | |||||||| || |||||||| ||||||||
Sbjct 190084 TTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATC 190025
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| || || ||||| || || | ||||||||||| |||||||| || ||||| |||
Sbjct 190024 AATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 189965
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| || || ||||| || ||||| ||||| |||||||| ||||| || ||
Sbjct 189964 ATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 189906
>seq112
Length=144762
Score = 109 bits (120), Expect = 1e-18
Identities = 152/212 (72%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| || || || || || || || |||||||| || |||| || || | || || |||
Sbjct 45891 ACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCC 45950
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
||||||||||| || ||||| ||||| || ||||| | | | |||||||||||||
Sbjct 45951 AGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGATGTGATCCCTTCCTTGTCCTAA 46010
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTC 211082
||||| || | ||| | ||| ||||| ||| |||||||| || |||||||||
Sbjct 46011 ATCTTGCTCTTGATGTTGTTGATTGTGTC---GCTCGACTCAACCTCCAGCGTGATCGTC 46067
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| | || || ||||| | || | ||||||
Sbjct 46068 TTGACAGTAAGTGTCTTCATGAAAATCTGCAT 46099
Score = 93.3 bits (102), Expect = 1e-13
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 210910 GGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCT 210969
|||| || || || || || |||||||| || || | ||| | |||||||| || |
Sbjct 46123 GGTGCAGGGTCGAGTCCTTCTGGATGTTGTAGTCGGACCTGGTGCGGCCATCTTCGAGTT 46182
Query 210970 GCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCT 211029
||||||| |||||||| ||||| || || || || |||| || ||||||||||||||||
Sbjct 46183 GCTTGCCGGCGAAGATCAGGCGCTGCTGTTCGGGCGGAATGCCCTCCTTGTCCTGGATCT 46242
Query 211030 T 211030
|
Sbjct 46243 T 46243
>seq46
Length=254406
Score = 100 bits (110), Expect = 7e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 139807 CTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAG 139866
||||| ||||||||||| |||| || |||||||| || ||||| | | || || ||
Sbjct 21771 CTTCCCAAGAAGCACGGTCGAGGTGGTCAATCTGCCCTACGTTTCGCCCGTCTCAGAGAG 21830
Query 139867 GAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAAA 139926
|||||| | ||||||||| || ||||||| |||||| || | || || |||| |
Sbjct 21831 GAAAAGCGTCACAACTACGTGCGAAAAGTCGCAGAGCTGGCTGTTCAAAACTTCATCACA 21890
Query 139927 GACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAA 139979
|| ||||| |||| | || ||||| | || ||||||||||| |||||
Sbjct 21891 AACGACAAGGTCAATGTTGCCGGCATTGTCCTTGCTGGTTCCGCAGATTTCAA 21943
>seq51
Length=241757
Score = 96.9 bits (106), Expect = 8e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | | ||| ||||| || || || || || |||||||| || || | || ||
Sbjct 20499 CGAAGACGCAAGACCAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTG 20440
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || ||||| || |||||||| |||||||| |||||||| ||||| || |||| |||
Sbjct 20439 CGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGGGGAATGCCT 20380
Query 211014 TCCTTGTC 211021
||||||||
Sbjct 20379 TCCTTGTC 20372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159145108841360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |