Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
>seq1
Length=1383374
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || | ||||||||| || || || || || ||| || || || |||| ||
Sbjct 702025 CACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTCCTC 701966
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
| ||| |||||||| || || || ||||||||||| | || | || ||| ||||||
Sbjct 701965 CAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 701906
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATAC 39250
||| ||| |||| ||| | | | ||| || ||| |||||| |||| ||| ||
Sbjct 701905 GATCTTCGACTTGA-CGTTGTCGATCGTGTCTGAGCT---CTCCACCTCCAGCGTAATCG 701850
Query 39251 TTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || || || || || || |||||||||||
Sbjct 701849 TCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
||| || || || || || |||| || || || |||| || || || ||||| || ||
Sbjct 701551 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAA 701492
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| || ||||||||||| | ||| | || ||| |||||| ||| || ||||| |
Sbjct 701491 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGATTTGACATT 701432
Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272
| | ||| ||||| ||||| || || | |||||| | || || || || || || ||
Sbjct 701431 GTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTCAC 701372
Query 39273 AAAGATTTGCAT 39284
|||||||||||
Sbjct 701371 GAAGATTTGCAT 701360
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
||| | ||| ||||| || || || || || || || | || || || |||| ||
Sbjct 701797 CACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 701738
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| ||||| ||||| || || ||||||||||||| || | | || ||||||
Sbjct 701737 CAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCCTG 701678
Query 39195 GATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
||| || |||| ||| | | | ||| |||||||| || || |||| |||||| | |
Sbjct 701677 GATCTTGCTCTTGA-CGTTGTCGATCGTGTCGCTCGATTCAACCTCCAGCGTGATCGTCT 701619
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || || || || || |||||||||||
Sbjct 701618 TGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429543170919632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |