Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 4e-25
seq17 125 2e-23
seq342 109 1e-18
seq51 107 5e-18
seq112 93.3 1e-13
>seq1
Length=1383374
Score = 131 bits (144), Expect = 4e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| |||||||| || | ||| | ||| || || |||| ||||| ||| | |||
Sbjct 702037 ACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGT 701978
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||| || || | |||||| || ||||| || || || || ||||| || ||||| ||
Sbjct 701977 CCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCC 701918
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| || ||||| ||||||||| | ||||| || |
Sbjct 701917 CTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAG 701858
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| ||||||||||| || | || |||| ||| | ||||||
Sbjct 701857 CGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || || ||||| || ||||| || |||| ||||| || | | || | || ||
Sbjct 701799 AGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCC 701740
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || || || ||||||||||| || |||||||||||
Sbjct 701739 TCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCC 701680
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||| ||||| | ||| || || | ||||||||||
Sbjct 701679 TGGATCTTGCTCTTGACGTTGTCGATCGTGTCGCTCGATTCAACCTCCAGCGTGATCGTC 701620
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | || |||| ||| | ||||||
Sbjct 701619 TTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701588
>seq17
Length=408214
Score = 125 bits (138), Expect = 2e-23
Identities = 126/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| ||| || ||||| |||||||| || ||||| || ||||||||
Sbjct 190084 TTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATC 190025
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| ||| || ||||||||||| || |||||||||||||||||||| ||| || |||
Sbjct 190024 AATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 189965
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| ||||| || | || || || | ||||| |||||||||||
Sbjct 189964 ATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 189921
>seq342
Length=3431
Score = 109 bits (120), Expect = 1e-18
Identities = 186/269 (69%), Gaps = 3/269 (1%)
Strand=Plus/Plus
Query 7445 TATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAA 7504
|||||||||| |||| | ||||| ||| | ||||| ||||| | | ||||
Sbjct 578 TATATTTAATGTTTGCAGTATTTTCAGGTTTAGCTGGTACAGCTTTTTCAGTATTAATAA 637
Query 7505 GGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACG 7564
| ||||||||| | | || || ||| | | | |||| ||| | |||||
Sbjct 638 GATTAGAATTATCAGGACCTGGAGTACAATTTATAGCAGATAAT---CAATTATACAATA 694
Query 7565 TTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAG 7624
||| || || || ||||| | || |||||||||||| | || ||||| | | | ||||
Sbjct 695 GTATAATAACAGCTCATGCTATAGTGATGATTTTCTTTATGGTAATGCCAGCTTTAATAG 754
Query 7625 GCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAA 7684
| ||||| || || | || | || |||||||| |||| ||| |||||||| || || |
Sbjct 755 GTGGTTTTGGTAACTTCTTACTACCATTAATGATAGGTGGTCCAGATATGGCATTCCCTA 814
Query 7685 GGCTTAACAATATAAGTTTTTGATTACTA 7713
| | || ||||||||||| |||||| ||
Sbjct 815 GATTAAATAATATAAGTTTCTGATTATTA 843
Score = 89.7 bits (98), Expect = 1e-12
Identities = 83/103 (81%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||| ||||| ||||| |||||||| | |||||| || | |||||||| || || ||||
Sbjct 1254 TTCTGGATGGCCAAAGAATCAGAAAAGATGTTGGTATAATATAGGATCTCCACCTCCTGC 1195
Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| ||||| |||| | ||||||||||||||||| ||||||||
Sbjct 1194 TACTTCAAAGAAAGAT-GTATTAAAATTTCTATCTGTTAAAAC 1153
>seq51
Length=241757
Score = 107 bits (118), Expect = 5e-18
Identities = 101/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | || ||| |||||||| || ||||| || |||| ||||| |||| | |||
Sbjct 20499 CGAAGACGCAAGACCAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTG 20440
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || ||||| || ||||| || |||||||| || ||||| ||||| || ||||| |||
Sbjct 20439 CGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGGGGAATGCCT 20380
Query 225613 TCCTTGTCT 225621
|||||||||
Sbjct 20379 TCCTTGTCT 20371
>seq112
Length=144762
Score = 93.3 bits (102), Expect = 1e-13
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 225509 GGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCT 225568
|||| || || || || || |||| ||||| |||| | || | |||||||| || |
Sbjct 46123 GGTGCAGGGTCGAGTCCTTCTGGATGTTGTAGTCGGACCTGGTGCGGCCATCTTCGAGTT 46182
Query 225569 GCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCT 225628
|||| || |||||||| || || || || ||||||||||| || |||||||| |||||||
Sbjct 46183 GCTTGCCGGCGAAGATCAGGCGCTGCTGTTCGGGCGGAATGCCCTCCTTGTCCTGGATCT 46242
Query 225629 T 225629
|
Sbjct 46243 T 46243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192524110402016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |