Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq66 82.4 6e-11 >seq66 Length=213812 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||| | ||| || || ||||| || || || || ||||| || || | || ||| Sbjct 202319 CGAAATGGCGCCATTGAAATCCGTAGACAGGGCCGAGATCTCCTTCCTCGCGGTCAACGA 202260 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTT 30132 | ||| |||||| | || |||| || ||||| |||||||||| | | || ||| Sbjct 202259 ATCCCAACTTGTCGAGGAATTCTCGCGAGCCGTTCCCGTCCCAGATGTGGATGCCTGCTT 202200 Query 30133 CTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30192 || ||||| || || | ||| | ||| ||||||||||||||||| ||| Sbjct 202199 CTGAGAGAGGC--TTCGATGTCGTGCAGCCTGATACGAACCACAGCAGCTCGGTGGTGAC 202142 Query 30193 GGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30230 ||| |||||| | || || ||||||||||||| Sbjct 202141 GGCTCGTAGAAAGACGCGTTTAGTGGTGAGGAGGGGAA 202104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406160903147104