Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq91 143 4e-29 >seq91 Length=177601 Score = 143 bits (158), Expect = 4e-29 Identities = 617/962 (64%), Gaps = 24/962 (2%) Strand=Plus/Plus Query 77685 GATGCTAGATTACAAACTGCTACCTCATT---AGCGTTGGCATATTGTATTATCTCGGTA 77741 || || ||||| || || || ||||||| ||| || |||| | ||||| || Sbjct 134901 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTG---TATTCGACAATCTCAGTG 134957 Query 77742 CATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAG 77801 || ||||| | | ||| || |||| || | |||||||||||| ||||||| | | Sbjct 134958 CAAAGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCG 135017 Query 77802 TCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAG 77861 ||||| || || ||| | || ||||| ||||| |||||| |||| |||| | ||| Sbjct 135018 TCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCAT 135077 Query 77862 ACGACTCT-AGCTTTTATCATAGATTTGTATC---GCCTCTCTCTTTCATATTGA--GTA 77915 | | ||| ||| |||| || | | | | | ||| | |||||| ||| Sbjct 135078 A-GTTTCTGAGCCTTTAC---AGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTA 135133 Query 77916 TATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCAC 77975 || ||| ||| || | | || || | || || | | ||||| |||| || || Sbjct 135134 TAGAGC-GTTGAACT-CGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAG 135191 Query 77976 ATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGA 78035 | | | ||| || | | || || |||| ||| || | ||||| |||| | Sbjct 135192 AAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATG 135251 Query 78036 GCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGA 78095 || || | || || | |||| ||||| || || |||||| | || | | | Sbjct 135252 GCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAA 135311 Query 78096 AACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTA 78155 || || | | || | |||||||| || || || || || | | | || || || ||| Sbjct 135312 AAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTA 135371 Query 78156 TTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 78215 || || |||||||| | || | || || ||||| | || | | ||| || |||| Sbjct 135372 TTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGC 135431 Query 78216 CCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAA 78273 ||||| || || || || || || | ||| || ||| | || ||||| | | | Sbjct 135432 CCGTTGGAGGTGCCGTTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCA 135491 Query 78274 TGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGT 78333 | || | || || ||||| || |||| || || | || ||| || | || || | Sbjct 135492 TTGAGA--CCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCAT 135549 Query 78334 AGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGAT 78393 | || ||||| || ||||| || |||||| || | |||||| |||| |||| | | Sbjct 135550 ATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTT 135609 Query 78394 GAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTA 78453 || ||||| || || || | || || || || || ||||| || || | || | | Sbjct 135610 GAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGA 135669 Query 78454 GATTGTATGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGC 78512 ||||||| || || || || ||| || || | || ||||| || || || |||||| Sbjct 135670 GATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGC 135728 Query 78513 ATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTT 78572 || | ||| || || || | |||| | | ||| || || | || ||||||| | Sbjct 135729 ATAAGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTC 135788 Query 78573 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAA 78632 |||| || || ||||||||||| | ||| ||||||| ||||| | ||| |||| Sbjct 135789 TCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCAGAG 135848 Query 78633 TT 78634 || Sbjct 135849 TT 135850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664770920960