Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq91 145 1e-29
>seq91
Length=177601
Score = 145 bits (160), Expect = 1e-29
Identities = 344/515 (67%), Gaps = 6/515 (1%)
Strand=Plus/Plus
Query 76709 TGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATA 76768
|||||||| || || || || || | | |||| || || ||||| || |||||||| |
Sbjct 135330 TGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACG 135389
Query 76769 TATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTT 76828
|| | ||||| ||||| | || | | ||| || |||| ||||| || || || ||
Sbjct 135390 TAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCGTTG 135449
Query 76829 GTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTC 76886
|| || | ||| || ||| |||||||| | | || || | || || ||||
Sbjct 135450 GTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGA--CCAATACCTC 135507
Query 76887 CTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTAT 76946
| || | || ||||| | ||||| || | |||||||| || ||||| || || |
Sbjct 135508 CAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATGCTGT 135567
Query 76947 CATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAA 77006
| || |||||| || | |||||| |||| |||| | ||| ||||| || || |
Sbjct 135568 CTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGA 135627
Query 77007 ACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAA 77066
| | || || || || || || || || || | || | |||||||| || || ||
Sbjct 135628 AAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTGTACGTCTCGATGG 135687
Query 77067 CTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGT 77125
| ||| ||||| | || ||||| || || || |||||||| | ||| || || ||
Sbjct 135688 CCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGCATAAGCATGTGTTGGGGC 135746
Query 77126 CGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCA 77185
||||| || | ||| || || | || ||||||| | |||| || || ||||||
Sbjct 135747 CGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCCAGCGTCTTGAAACCA 135806
Query 77186 AAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220
||||| | ||| ||||||| ||||| | |||
Sbjct 135807 AAATATTGGTAGTTGAAGTCTCGGTCGTAGACAAT 135841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712930264980480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |