Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq91 145 1e-29 >seq91 Length=177601 Score = 145 bits (160), Expect = 1e-29 Identities = 344/515 (67%), Gaps = 6/515 (1%) Strand=Plus/Plus Query 76709 TGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATA 76768 |||||||| || || || || || | | |||| || || ||||| || |||||||| | Sbjct 135330 TGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACG 135389 Query 76769 TATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTT 76828 || | ||||| ||||| | || | | ||| || |||| ||||| || || || || Sbjct 135390 TAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCGTTG 135449 Query 76829 GTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTC 76886 || || | ||| || ||| |||||||| | | || || | || || |||| Sbjct 135450 GTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGA--CCAATACCTC 135507 Query 76887 CTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTAT 76946 | || | || ||||| | ||||| || | |||||||| || ||||| || || | Sbjct 135508 CAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATGCTGT 135567 Query 76947 CATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAA 77006 | || |||||| || | |||||| |||| |||| | ||| ||||| || || | Sbjct 135568 CTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGA 135627 Query 77007 ACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAA 77066 | | || || || || || || || || || | || | |||||||| || || || Sbjct 135628 AAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTGTACGTCTCGATGG 135687 Query 77067 CTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGT 77125 | ||| ||||| | || ||||| || || || |||||||| | ||| || || || Sbjct 135688 CCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGCATAAGCATGTGTTGGGGC 135746 Query 77126 CGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCA 77185 ||||| || | ||| || || | || ||||||| | |||| || || |||||| Sbjct 135747 CGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCCAGCGTCTTGAAACCA 135806 Query 77186 AAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||| | ||| ||||||| ||||| | ||| Sbjct 135807 AAATATTGGTAGTTGAAGTCTCGGTCGTAGACAAT 135841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930264980480