Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 2e-21
seq17 109 1e-18
>seq1
Length=1383374
Score = 118 bits (130), Expect = 2e-21
Identities = 160/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || || || || ||||| || ||||||||||| |||| | || |
Sbjct 701578 GAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 701519
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| ||||| || || ||||||||||| || | ||||||||||| | ||| || ||
Sbjct 701518 GCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTC 701459
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGA 152063
||| || || || || ||||||| | || | |||| || |||| || |||||
Sbjct 701458 CTTGTCCTGGATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCG--ACCTCAAGC 701401
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || ||||||||||||| |||||
Sbjct 701400 GTGATGGTCTTGCCAGTAAGTGTCTTCACGAAGATTTGCAT 701360
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972
||| || ||||||||||| ||| | ||| | ||| || || | || || |||||
Sbjct 702007 CTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAA 701948
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
|| |||| ||||||||||| | || || ||||| || || || || ||||| |
Sbjct 701947 AATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 701888
Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092
|| | ||||||| ||||| || || || ||||| || ||||| || || ||||| ||
Sbjct 701887 GTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTAC 701828
Query 152093 GAAGACCTGCAT 152104
||||| |||||
Sbjct 701827 GAAGATTTGCAT 701816
>seq17
Length=408214
Score = 109 bits (120), Expect = 1e-18
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| ||| | ||||| |||||||| || || |||||||||||
Sbjct 190084 TTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATC 190025
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
| | ||||||||| | || ||| |||||||| ||||| || || ||||| | ||
Sbjct 190024 AATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 189965
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| |||| || ||| || ||||| || || || ||||||||||| ||||| ||||||
Sbjct 189964 ATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 189905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153813940535344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |