Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11- 19] 464 sequences; 41,583,904 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1 118 2e-21 seq17 109 1e-18 >seq1 Length=1383374 Score = 118 bits (130), Expect = 2e-21 Identities = 160/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| |||| | || | Sbjct 701578 GAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 701519 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || ||||||||||| || | ||||||||||| | ||| || || Sbjct 701518 GCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTC 701459 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGA 152063 ||| || || || || ||||||| | || | |||| || |||| || ||||| Sbjct 701458 CTTGTCCTGGATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCG--ACCTCAAGC 701401 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || ||||||||||||| ||||| Sbjct 701400 GTGATGGTCTTGCCAGTAAGTGTCTTCACGAAGATTTGCAT 701360 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| || ||||||||||| ||| | ||| | ||| || || | || || ||||| Sbjct 702007 CTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAA 701948 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 || |||| ||||||||||| | || || ||||| || || || || ||||| | Sbjct 701947 AATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 701888 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | ||||||| ||||| || || || ||||| || ||||| || || ||||| || Sbjct 701887 GTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTAC 701828 Query 152093 GAAGACCTGCAT 152104 ||||| ||||| Sbjct 701827 GAAGATTTGCAT 701816 >seq17 Length=408214 Score = 109 bits (120), Expect = 1e-18 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| ||| | ||||| |||||||| || || ||||||||||| Sbjct 190084 TTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATC 190025 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | | ||||||||| | || ||| |||||||| ||||| || || ||||| | || Sbjct 190024 AATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 189965 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | |||| || ||| || ||||| || || || ||||||||||| ||||| |||||| Sbjct 189964 ATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 189905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153813940535344