Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1 158 9e-34
seq112 123 2e-23
seq17 96.9 2e-15
>seq1
Length=1383374
Score = 158 bits (174), Expect = 9e-34
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | |||||||| ||||| ||| | |||||||||||| ||||||||||| ||| |
Sbjct 702042 CCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 701983
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| |||| |||| |||||| || || || |||| |||||||| || | |||
Sbjct 701982 AGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGA 701923
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| |||||| ||| | | | || ||||| | | ||||||
Sbjct 701922 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACC 701863
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| |||||||||||| || || || ||||| ||||||||||||||
Sbjct 701862 TCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816
Score = 138 bits (152), Expect = 8e-28
Identities = 157/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| || || ||||| ||||| ||||||||||| || | ||| ||| |||| ||
Sbjct 701797 CACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 701738
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || |||||||||| |||||||| || | || | |||||||| |||
Sbjct 701737 CAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCCTG 701678
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || |||||| ||||| ||||||| ||| ||||||||
Sbjct 701677 GATCTTGCTCTTGACGTTGTCGATCGTGTCGCTCGATTCAACCTCCAGCGTGATCGTCTT 701618
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || || ||||| |||||||||||||||
Sbjct 701617 GCCAGTAAGTGTCTTTACGAAGATTTGCATG 701587
Score = 125 bits (138), Expect = 5e-24
Identities = 156/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || || |||||| ||||||||||| |||| || ||| |||| ||
Sbjct 701568 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCG 701509
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| ||||||| |||||||| || | || | || ||||| |||
Sbjct 701508 AGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 701449
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| || || ||| | || |||||| ||| || ||||| | ||| || ||||
Sbjct 701448 ATCTTGGATTTGACATTGT--CGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCT 701391
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| || || || |||||||||||||||||||||
Sbjct 701390 TGCCAGTAAGTGTCTTCACGAAGATTTGCATG 701359
>seq112
Length=144762
Score = 123 bits (136), Expect = 2e-23
Identities = 156/212 (74%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| || || ||||| ||||| ||||||||||| || | ||| ||| |||| ||
Sbjct 45890 CACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 45949
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || |||||||||| |||||||| || || | | |||||||| |||
Sbjct 45950 CAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGATGTGATCCCTTCCTTGTCCTA 46009
Query 44248 TATCTTCTGCTTCAATGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| ||||| | || |||||| || || ||||||| ||| |||||||
Sbjct 46010 AATCTTGCTCTT-GATGTTGTTGATTGTGTCGCTCGACTCAACCTCCAGCGTGATCGTCT 46068
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| | || || ||||||| ||| || ||||||
Sbjct 46069 TGACAGTAAGTGTCTTCATGAAAATCTGCATG 46100
>seq17
Length=408214
Score = 96.9 bits (106), Expect = 2e-15
Identities = 134/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||| ||||||||||| ||| ||||| | || | || || || ||||| ||||| ||
Sbjct 190086 CCTTCTGGATGTTGTAGTCGCTCAGAGTTCG-GC-CATCTTCAAGTTGCTTGCCGGCGAA 190029
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|||||| |||||||| || | || | |||||||| || ||||| ||| | |
Sbjct 190028 GATCAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTT 189969
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||||| || || ||||| | || || ||||| |||||||||||||| ||
Sbjct 189968 GTCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 189909
Query 44326 GAAG 44329
||||
Sbjct 189908 GAAG 189905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359988364254288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |