Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000785585.1_202014-11-
19] 464 sequences; 41,583,904 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1 174 1e-38
seq112 141 9e-29
seq51 129 5e-25
seq17 87.8 2e-12
>seq1
Length=1383374
Score = 174 bits (192), Expect = 1e-38
Identities = 178/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || ||||| | ||||| ||||| || ||||||||| ||||| ||||||||
Sbjct 701587 GCCGCCACGGAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 701528
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||||| |||| ||||| |||||||||||||| ||||||||||| ||||||| |||
Sbjct 701527 CAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 701468
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||||||| || | || | || || | | | |||||||| ||||| |
Sbjct 701467 GATGCCCTCCTTGTCC-TGGATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCGA 701409
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | ||| || || || || || || ||||| ||||| || ||||||
Sbjct 701408 CCTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTCACGAAGATTTGCATG 701359
Score = 167 bits (184), Expect = 2e-36
Identities = 178/230 (77%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|||||||| || || | ||| ||||| ||||| |||||||| ||||| ||||| |||
Sbjct 701814 CCGCCGCGGAGCCGGAGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAG 701755
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754
|| ||||| |||| || ||||||||||| || || ||||||||||| ||||| |||||
Sbjct 701754 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 701695
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | || ||||||||| ||| || ||| ||| | | | ||||||||||| || |
Sbjct 701694 ATCCCT-TCCTTGTCCTGGATCTTGCTCTT-GACGTTGTCGATCGTGTCGCTCGATTCAA 701637
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||| ||| ||||| || || || || ||||||||||| || ||||||
Sbjct 701636 CCTCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCATG 701587
Score = 156 bits (172), Expect = 4e-33
Identities = 176/232 (76%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || || | | ||||| |||| ||||||||||||||| ||||| ||||||
Sbjct 702043 GCCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCT 701984
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||| || ||| |||| || | ||||||||| ||||| ||||| ||||| ||||||| ||
Sbjct 701983 GAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGG 701924
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810
|| || |||||||||| ||| || ||| ||| | | | ||||| ||| ||
Sbjct 701923 AATGCCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATCGTGTCTGAGCT---CT 701868
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||||| ||| ||||| || || || || ||||||||||| || |||||
Sbjct 701867 CCACCTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 701816
>seq112
Length=144762
Score = 141 bits (156), Expect = 9e-29
Identities = 171/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| || || ||| ||||| ||||| |||||||| ||||| ||||| ||
Sbjct 45872 GCCGCCGCGGAGGCGGGGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGA 45931
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG-CGG 41753
||| ||||| |||| || ||||||||||| || || ||||||||||| ||||| | |
Sbjct 45932 GAGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGATGT 45991
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCA 41813
|| | || ||||||||| || || ||| | | |||||||||||||| |
Sbjct 45992 GATCCCT-TCCTTGTCCTAAATCTTGCTCTTGATGTTGTTGATTGTGTCGCTCGACTCAA 46050
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||| ||| ||||| || | || || ||||| | |||||||||||||
Sbjct 46051 CCTCCAGCGTGATCGTCTTGACAGTAAGTGTCTTCATGAAAATCTGCATG 46100
Score = 102 bits (112), Expect = 8e-17
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || || | | ||| | ||||| || |||||||| ||||| ||||||||
Sbjct 46100 GCCGCCACGCAGGTGGATGACCGGGTGCAGGGTCGAGTCCTTCTGGATGTTGTAGTCGGA 46159
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||| | || ||||| |||||||||||||| ||||||||||| || || | ||
Sbjct 46160 CCTGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGTTCGGGCGG 46219
Query 41755 AACGCTCTCCTTGTCCATGATTTT 41778
|| || |||||||||| ||| ||
Sbjct 46220 AATGCCCTCCTTGTCCTGGATCTT 46243
>seq51
Length=241757
Score = 129 bits (142), Expect = 5e-25
Identities = 109/134 (81%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| || ||||| || || || |||||||| ||||| |||||||||
Sbjct 20505 CCACCGCGAAGACGCAAGACCAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAG 20446
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| ||||| |||||||||||||| |||||||| || ||||||| ||||
Sbjct 20445 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGGGGA 20386
Query 41756 ACGCTCTCCTTGTC 41769
| || ||||||||
Sbjct 20385 ATGCCTTCCTTGTC 20372
>seq17
Length=408214
Score = 87.8 bits (96), Expect = 2e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| || || || | || || || |||||||||||||| |
Sbjct 190086 CCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGA 190027
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
||| ||||| ||||| | || | || |||||||| ||| || ||| ||| |
Sbjct 190026 TCAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTT-GACGTTG 189968
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||| |||||| ||||| | || || || || ||||| || ||||| |||
Sbjct 189967 TCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 189908
Query 41852 AA 41853
||
Sbjct 189907 AA 189906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462301318636800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |