Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=8230860 Score = 118 bits (130), Expect = 1e-21 Identities = 210/301 (70%), Gaps = 4/301 (1%) Strand=Plus/Plus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | ||| || ||||| || || || | ||||||||| |||| || Sbjct 2004491 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTC 2004550 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || | || || || ||||| ||||| || || ||||||| ||| || Sbjct 2004551 TTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCGAAA 2004610 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 || | || ||||| ||| | ||| ||||||| |||||| | | |||| || Sbjct 2004611 GCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCTGATATCCATCGCAGAGCCCAGTCT 2004670 Query 17165 GCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA-ATTTCTCTTTTTCCT 17222 ||||| |||| |||||| || || || ||||| | || | || | |||| | | Sbjct 2004671 GCTTTCTTGCGA-ATGCAAGGGATTGTGTCGATGGCGTCGAACAGATATGTCTTCTCTTT 2004729 Query 17223 GTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCA 17282 | |||| ||| ||| || || ||||| |||||||||||||| ||||| || ||||||| Sbjct 2004730 GG-GGTCCTTTACATAGGTGTCAATGAGAAGGCTGTACATTTCCGAGTGGATATTCTCCA 2004788 Query 17283 T 17283 | Sbjct 2004789 T 2004789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543807998360